Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0278

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
281,081	+				-0.1
281,081	+				+1.3
281,081	+				+0.8
281,081	+				+0.5
281,082	-				+0.1
281,085	+				+0.3
281,101	-				-0.4
281,101	-				-1.6
281,143	-				+0.6
281,143	-				+0.6
281,147	+				-0.7
281,147	+				+0.0
281,148	-				+1.4
281,148	-				+0.3
281,192	+				+0.1
281,195	+				+1.5
281,200	+				-0.9
281,200	+				+0.5
281,200	+				-1.3
281,201	-				-1.6
281,201	-				+0.1
281,201	-				+0.2
281,201	-				+0.9
281,258	+				-0.6
281,259	-				-1.0
281,334	+				+0.1
281,347	+				+0.4
281,353	+				-1.7
281,449	-				-0.0
281,452	+				-1.6
281,482	-				+0.6
281,484	+				+0.5
281,509	+				+0.9
281,509	+				+0.1
281,509	+				-1.6
281,510	-				+0.3
281,510	-				-0.9
281,510	-				-0.1
281,510	-				-1.2
281,512	+				+0.6
281,512	+				-1.3
281,513	-				-0.9
281,519	+				+0.1
281,519	+				+0.2
281,551	-				+0.2
281,551	-				-1.5
281,551	-				-2.2
281,551	-				-0.5
281,554	+				-0.5
281,554	+				+1.1
281,555	-				-0.1
281,555	-				+0.1
281,555	-				-0.1
281,625	-		Echvi_0278	0.18	-0.2
281,625	-		Echvi_0278	0.18	-0.1
281,637	+		Echvi_0278	0.26	+0.1
281,638	-		Echvi_0278	0.27	+1.2
281,638	-		Echvi_0278	0.27	+0.5
281,644	+		Echvi_0278	0.31	+0.3
281,644	+		Echvi_0278	0.31	-1.7
281,645	-		Echvi_0278	0.32	-1.7
281,645	-		Echvi_0278	0.32	-1.4
281,645	-		Echvi_0278	0.32	-0.5
281,645	-		Echvi_0278	0.32	-1.3
281,645	-		Echvi_0278	0.32	-1.5
281,646	+		Echvi_0278	0.33	-1.6
281,647	-		Echvi_0278	0.33	-0.0
281,714	+		Echvi_0278	0.81	-1.6
281,718	-		Echvi_0278	0.84	-0.1
281,726	-		Echvi_0278	0.89	-0.3
281,728	+				-0.1
281,728	+				-0.2
281,728	+				-1.8
281,728	+				-0.8
281,729	-				+0.1
281,729	-				+1.5
281,729	-				+0.5
281,729	-				-0.1
281,731	+				+0.1
281,732	-				+0.1
281,732	-				+0.6
281,732	-				+0.5
281,732	-				+0.8
281,732	-				-0.5
281,732	-				-0.9
281,732	-				-0.9
281,732	-				-0.5
281,735	+				-1.8
281,735	+				-0.3
281,735	+				-0.9
281,735	+				-0.2
281,735	+				+0.3
281,735	+				-1.9
281,735	+				+0.2
281,735	+				+0.8
281,736	-				-1.1
281,736	-				+0.5
281,736	-				+0.1
281,736	-				+0.3
281,736	-				-0.8
281,736	-				+2.1
281,741	-				+0.6
281,750	+				-1.4
281,803	-				+0.7
281,813	+				+0.3
281,814	-				-1.1
281,814	-				-0.9
281,815	+				-2.5
281,816	-				-1.6
281,901	-				-0.8
281,944	+				-0.5
281,945	-				+0.4
281,947	+				+0.8
281,957	+				+0.4
281,985	+				-1.2
282,093	+				-0.4
282,093	+				+1.1
282,172	-				-0.0
282,214	+		Echvi_0279	0.11	-2.5
282,214	+		Echvi_0279	0.11	+0.4
282,219	+		Echvi_0279	0.11	-1.5
282,234	+				+1.1
282,235	-		Echvi_0279	0.12	+0.3
282,256	+		Echvi_0279	0.13	-0.1
282,291	+		Echvi_0279	0.14	-0.7
282,292	-		Echvi_0279	0.14	+1.0
282,304	-		Echvi_0279	0.14	-1.5
282,455	-		Echvi_0279	0.20	+0.2
282,481	+		Echvi_0279	0.21	+1.1
282,496	-		Echvi_0279	0.22	-1.6
282,520	-		Echvi_0279	0.23	-0.0
282,624	+		Echvi_0279	0.26	+1.0
282,624	+		Echvi_0279	0.26	-0.2
282,625	-		Echvi_0279	0.27	+1.4
282,658	+		Echvi_0279	0.28	+0.4
282,658	+		Echvi_0279	0.28	+0.1
282,658	+		Echvi_0279	0.28	-1.1
282,658	+		Echvi_0279	0.28	+1.5
282,701	+		Echvi_0279	0.29	-0.2
282,701	+		Echvi_0279	0.29	+0.6
282,702	-		Echvi_0279	0.29	-0.1
282,703	+		Echvi_0279	0.29	+0.2
282,703	+		Echvi_0279	0.29	-0.6
282,703	+		Echvi_0279	0.29	-0.7
282,703	+		Echvi_0279	0.29	-0.1
282,704	-		Echvi_0279	0.30	-0.2
282,704	-		Echvi_0279	0.30	+0.9
282,704	-		Echvi_0279	0.30	+0.2