Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0114

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
108,302	+		Echvi_0113	0.56	+0.1
108,302	+		Echvi_0113	0.56	+2.7
108,302	+		Echvi_0113	0.56	-1.1
108,303	-		Echvi_0113	0.56	+0.8
108,306	+		Echvi_0113	0.56	-0.5
108,306	+		Echvi_0113	0.56	-0.2
108,307	-		Echvi_0113	0.56	+1.8
108,379	+		Echvi_0113	0.61	-0.1
108,398	+		Echvi_0113	0.62	-0.2
108,416	-		Echvi_0113	0.63	+0.5
108,416	-		Echvi_0113	0.63	+0.4
108,467	+		Echvi_0113	0.66	-0.2
108,467	+		Echvi_0113	0.66	+0.9
108,467	+		Echvi_0113	0.66	-0.6
108,468	-		Echvi_0113	0.66	+0.6
108,468	-		Echvi_0113	0.66	-0.1
108,468	-		Echvi_0113	0.66	-0.5
108,535	-		Echvi_0113	0.70	+0.7
108,627	-		Echvi_0113	0.76	+0.1
108,755	-		Echvi_0113	0.84	-0.4
108,810	-		Echvi_0113	0.87	-0.9
108,869	+				+0.8
108,870	-				+1.3
109,027	-				-0.1
109,027	-				+0.5
109,027	-				+0.4
109,027	-				+0.9
109,027	-				-0.4
109,028	+				+0.8
109,028	+				-2.2
109,029	-				+0.8
109,056	+				-0.4
109,057	-				+0.4
109,195	+				+1.1
109,196	-				-1.1
109,231	+				-0.9
109,232	-				-0.7
109,333	+		Echvi_0114	0.20	-3.0
109,333	+		Echvi_0114	0.20	+0.1
109,333	+		Echvi_0114	0.20	-1.6
109,334	-		Echvi_0114	0.20	-1.2
109,418	+		Echvi_0114	0.31	-2.4
109,430	-		Echvi_0114	0.32	-0.7
109,459	+		Echvi_0114	0.36	-0.8
109,492	+		Echvi_0114	0.40	-2.1
109,504	+		Echvi_0114	0.42	-1.0
109,505	-		Echvi_0114	0.42	+0.1
109,543	-		Echvi_0114	0.47	-0.2
109,585	+		Echvi_0114	0.52	-1.4
109,585	+		Echvi_0114	0.52	-2.1
109,670	+		Echvi_0114	0.62	+0.5
109,695	-		Echvi_0114	0.66	+0.5
109,741	+		Echvi_0114	0.71	-0.5
109,741	+		Echvi_0114	0.71	-2.4
109,859	+		Echvi_0114	0.86	-3.4
109,942	-				+2.5
109,980	+				-0.8
109,980	+				+0.2
109,980	+				-0.4
109,986	+				+0.0
110,028	+				-1.2
110,028	+				-1.2
110,051	+				+0.7