Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0104

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
100,730	+		Echvi_0102	0.36	+0.5
100,739	+		Echvi_0102	0.38	-0.5
100,753	+		Echvi_0102	0.41	+0.8
100,883	+		Echvi_0102	0.72	-1.8
100,892	+		Echvi_0102	0.74	-0.8
100,935	+		Echvi_0102	0.84	-0.5
100,951	+		Echvi_0102	0.87	+1.4
100,955	+		Echvi_0102	0.88	-0.2
101,021	+				+1.1
101,021	+				-0.2
101,060	+				-0.6
101,122	+		Echvi_0103	0.21	+0.3
101,218	-		Echvi_0103	0.39	+0.4
101,237	-		Echvi_0103	0.43	-0.4
101,237	-		Echvi_0103	0.43	-0.3
101,295	+		Echvi_0103	0.54	-0.3
101,295	+		Echvi_0103	0.54	-0.8
101,306	-		Echvi_0103	0.56	-0.8
101,306	-		Echvi_0103	0.56	+0.8
101,309	+		Echvi_0103	0.57	+1.1
101,321	+		Echvi_0103	0.59	+0.7
101,321	+		Echvi_0103	0.59	-0.4
101,326	+		Echvi_0103	0.60	+0.5
101,336	-		Echvi_0103	0.62	+0.5
101,469	+		Echvi_0103	0.88	-0.4
101,469	+		Echvi_0103	0.88	-0.3
101,469	+		Echvi_0103	0.88	+0.2
101,470	-		Echvi_0103	0.88	+1.1
101,470	-		Echvi_0103	0.88	+0.4
101,470	-		Echvi_0103	0.88	-0.2
101,478	+		Echvi_0103	0.89	-1.0
101,536	-				-0.4
101,538	+				+0.2
101,559	+				-0.6
101,587	+				-0.2
101,588	-				+0.5
101,629	+				+2.0
101,652	+				+0.1
101,652	+				+1.0
101,653	-				-1.2
101,700	+		Echvi_0104	0.19	-0.8
101,701	-		Echvi_0104	0.20	-0.5
101,739	-		Echvi_0104	0.31	+0.2
101,973	+				-1.2
101,973	+				+1.1
101,973	+				-0.1
101,974	-				+0.5
102,152	+		Echvi_0105	0.35	+1.2
102,153	-		Echvi_0105	0.35	-0.9
102,153	-		Echvi_0105	0.35	+0.4
102,229	+		Echvi_0105	0.50	-0.1
102,229	+		Echvi_0105	0.50	+0.8
102,230	-		Echvi_0105	0.50	+3.1
102,230	-		Echvi_0105	0.50	-0.7
102,231	+		Echvi_0105	0.51	-0.1
102,231	+		Echvi_0105	0.51	+0.2
102,232	-		Echvi_0105	0.51	+1.1
102,267	-		Echvi_0105	0.58	-0.3
102,361	+		Echvi_0105	0.77	-1.2
102,362	-		Echvi_0105	0.77	+0.2
102,455	+				+0.6
102,455	+				-1.0
102,456	-				+0.2
102,456	-				-0.1
102,458	-				+0.4
102,476	-				+0.0
102,501	-				+0.5
102,522	+				+0.2
102,524	+				-0.8
102,601	+		Echvi_0106	0.17	-0.8
102,688	-		Echvi_0106	0.36	+0.4
102,688	-		Echvi_0106	0.36	-1.1
102,688	-		Echvi_0106	0.36	+0.3
102,691	+		Echvi_0106	0.37	-1.2
102,691	+		Echvi_0106	0.37	+0.3
102,692	-		Echvi_0106	0.37	-0.9
102,919	+		Echvi_0106	0.86	-2.8
102,920	-		Echvi_0106	0.86	-1.6
102,920	-		Echvi_0106	0.86	+1.5
102,920	-		Echvi_0106	0.86	-1.4
102,921	+		Echvi_0106	0.87	+1.7
102,921	+		Echvi_0106	0.87	-0.2
102,952	+				+1.3
102,953	-				+2.1