Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0034

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
30,813	+		Echvi_0032	0.35	+0.9
30,813	+		Echvi_0032	0.35	-1.1
30,814	-		Echvi_0032	0.35	+0.7
30,814	-		Echvi_0032	0.35	-0.2
31,010	+		Echvi_0032	0.50	+0.3
31,010	+		Echvi_0032	0.50	-1.0
31,010	+		Echvi_0032	0.50	-1.8
31,011	-		Echvi_0032	0.50	-0.6
31,011	-		Echvi_0032	0.50	+0.0
31,014	+		Echvi_0032	0.50	+0.4
31,015	-		Echvi_0032	0.50	+1.1
31,159	-		Echvi_0032	0.61	+0.1
31,159	-		Echvi_0032	0.61	-0.1
31,161	-		Echvi_0032	0.61	+1.4
31,170	+		Echvi_0032	0.62	+1.0
31,170	+		Echvi_0032	0.62	-1.3
31,175	+		Echvi_0032	0.63	+0.7
31,175	+		Echvi_0032	0.63	-1.1
31,228	-		Echvi_0032	0.67	+0.1
31,239	+		Echvi_0032	0.67	+0.0
31,266	+		Echvi_0032	0.69	-1.3
31,266	+		Echvi_0032	0.69	+0.2
31,266	+		Echvi_0032	0.69	+0.3
31,272	+		Echvi_0032	0.70	+0.0
31,273	-		Echvi_0032	0.70	-1.0
31,277	+		Echvi_0032	0.70	+0.3
31,297	-		Echvi_0032	0.72	-1.1
31,458	-		Echvi_0032	0.84	+0.1
31,464	-		Echvi_0032	0.85	+0.5
31,521	+		Echvi_0032	0.89	-0.5
31,521	+		Echvi_0032	0.89	-2.0
31,521	+		Echvi_0032	0.89	-0.1
31,522	-		Echvi_0032	0.89	+0.1
31,522	-		Echvi_0032	0.89	+0.0
31,522	-		Echvi_0032	0.89	+1.4
31,619	+				+4.1
31,620	-				-0.5
31,890	+				+1.4
31,920	-				+1.4
32,017	+		Echvi_0034	0.13	+0.0
32,038	+		Echvi_0034	0.15	-0.0
32,048	+		Echvi_0034	0.15	-0.9
32,049	-		Echvi_0034	0.15	-0.2
32,049	-		Echvi_0034	0.15	+0.8
32,172	+		Echvi_0034	0.23	+0.2
32,172	+		Echvi_0034	0.23	-0.9
32,172	+		Echvi_0034	0.23	+1.2
32,172	+		Echvi_0034	0.23	+0.5
32,179	+		Echvi_0034	0.23	+0.5
32,180	-		Echvi_0034	0.23	+0.1
32,283	+		Echvi_0034	0.29	+0.8
32,284	-		Echvi_0034	0.29	-0.5
32,362	+		Echvi_0034	0.34	+1.6
32,369	-		Echvi_0034	0.34	+0.9
32,369	-		Echvi_0034	0.34	+0.9
32,446	+		Echvi_0034	0.39	+0.4
32,455	-		Echvi_0034	0.39	+1.0
32,455	-		Echvi_0034	0.39	+1.0
32,517	+		Echvi_0034	0.43	+0.4
32,721	+		Echvi_0034	0.55	+0.5
32,722	-				-0.2
32,726	-		Echvi_0034	0.56	-1.6
32,828	-		Echvi_0034	0.62	+1.6
32,828	-		Echvi_0034	0.62	-0.9
32,830	-		Echvi_0034	0.62	-0.2
33,314	-				+2.1
33,314	-				-0.6
33,354	-				+1.2
33,473	-				+0.8
33,490	+				-0.5
33,490	+				-1.0
33,554	+				-1.2
33,634	-				-0.0
33,638	+				+0.0
33,658	+				+1.8
33,659	-				+1.1
33,670	+				+0.4
33,671	-				+0.4
33,729	+				+1.0
33,855	+		Echvi_0035	0.19	+0.9
33,856	-		Echvi_0035	0.19	-0.2
33,886	+		Echvi_0035	0.21	-1.2
34,115	+		Echvi_0035	0.39	-1.2
34,115	+		Echvi_0035	0.39	-0.3
34,116	-		Echvi_0035	0.39	-1.2
34,116	-		Echvi_0035	0.39	+0.5
34,147	-		Echvi_0035	0.41	+0.1
34,183	+		Echvi_0035	0.44	-1.8
34,184	-		Echvi_0035	0.44	-0.1
34,184	-		Echvi_0035	0.44	+0.5
34,346	-		Echvi_0035	0.57	+0.6
34,427	+		Echvi_0035	0.63	+1.5
34,427	+		Echvi_0035	0.63	+0.2
34,427	+		Echvi_0035	0.63	+1.5
34,445	-		Echvi_0035	0.64	+0.5