Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0848 and Atu0849 are separated by 61 nucleotides Atu0849 and Atu0850 are separated by 23 nucleotides Atu0850 and Atu0851 are separated by 581 nucleotides
Atu0848: Atu0848 - hypothetical protein, at 849,385 to 849,768
Atu0848
Atu0849: Atu0849 - hypothetical protein, at 849,830 to 850,489
Atu0849
Atu0850: Atu0850 - ABC transporter, nucleotide binding/ATPase protein, at 850,513 to 851,874
Atu0850
Atu0851: Atu0851 - hypothetical protein, at 852,456 to 852,878
Atu0851
Position (kb) 850
851
852 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 849.846 kb on - strand at 850.134 kb on + strand, within Atu0849 at 850.175 kb on + strand, within Atu0849 at 850.183 kb on - strand, within Atu0849 at 850.239 kb on - strand, within Atu0849 at 850.255 kb on + strand, within Atu0849 at 850.273 kb on + strand, within Atu0849 at 850.328 kb on + strand, within Atu0849 at 850.328 kb on + strand, within Atu0849 at 850.336 kb on - strand, within Atu0849 at 850.336 kb on - strand, within Atu0849 at 850.423 kb on + strand, within Atu0849 at 850.468 kb on - strand at 850.556 kb on + strand at 850.564 kb on - strand at 850.585 kb on + strand at 850.772 kb on + strand, within Atu0850 at 850.915 kb on + strand, within Atu0850 at 850.953 kb on + strand, within Atu0850 at 850.991 kb on + strand, within Atu0850 at 851.137 kb on + strand, within Atu0850 at 851.137 kb on + strand, within Atu0850 at 851.145 kb on + strand, within Atu0850 at 851.197 kb on + strand, within Atu0850 at 851.237 kb on + strand, within Atu0850 at 851.263 kb on + strand, within Atu0850 at 851.405 kb on + strand, within Atu0850 at 851.414 kb on + strand, within Atu0850 at 851.485 kb on + strand, within Atu0850 at 851.515 kb on - strand, within Atu0850 at 851.547 kb on - strand, within Atu0850 at 851.613 kb on + strand, within Atu0850 at 851.621 kb on - strand, within Atu0850 at 851.623 kb on + strand, within Atu0850 at 851.738 kb on + strand at 851.766 kb on - strand at 851.779 kb on - strand at 851.890 kb on + strand at 851.906 kb on - strand at 852.062 kb on - strand at 852.162 kb on - strand at 852.165 kb on + strand at 852.174 kb on - strand at 852.211 kb on + strand at 852.283 kb on + strand at 852.291 kb on - strand at 852.298 kb on + strand at 852.301 kb on - strand at 852.301 kb on - strand at 852.301 kb on - strand at 852.306 kb on - strand at 852.427 kb on + strand at 852.462 kb on - strand at 852.490 kb on - strand at 852.490 kb on - strand at 852.621 kb on + strand, within Atu0851 at 852.656 kb on + strand, within Atu0851 at 852.664 kb on - strand, within Atu0851 at 852.716 kb on + strand, within Atu0851 at 852.769 kb on + strand, within Atu0851 at 852.806 kb on + strand, within Atu0851 at 852.810 kb on - strand, within Atu0851 at 852.825 kb on - strand, within Atu0851
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 849,846 - +2.2 850,134 + Atu0849 0.46 +1.3 850,175 + Atu0849 0.52 -0.7 850,183 - Atu0849 0.53 -0.2 850,239 - Atu0849 0.62 +0.4 850,255 + Atu0849 0.64 +2.1 850,273 + Atu0849 0.67 +0.6 850,328 + Atu0849 0.75 -1.1 850,328 + Atu0849 0.75 -0.4 850,336 - Atu0849 0.77 +0.7 850,336 - Atu0849 0.77 -1.8 850,423 + Atu0849 0.90 -0.9 850,468 - +0.6 850,556 + +0.5 850,564 - -0.6 850,585 + +0.5 850,772 + Atu0850 0.19 +0.7 850,915 + Atu0850 0.30 -0.6 850,953 + Atu0850 0.32 -2.1 850,991 + Atu0850 0.35 +3.1 851,137 + Atu0850 0.46 -0.2 851,137 + Atu0850 0.46 -0.7 851,145 + Atu0850 0.46 -0.5 851,197 + Atu0850 0.50 -0.1 851,237 + Atu0850 0.53 -0.3 851,263 + Atu0850 0.55 -0.6 851,405 + Atu0850 0.65 -1.4 851,414 + Atu0850 0.66 -0.6 851,485 + Atu0850 0.71 -0.7 851,515 - Atu0850 0.74 +0.2 851,547 - Atu0850 0.76 +0.2 851,613 + Atu0850 0.81 +0.7 851,621 - Atu0850 0.81 -0.5 851,623 + Atu0850 0.81 -1.3 851,738 + +1.1 851,766 - +0.4 851,779 - -0.3 851,890 + +0.4 851,906 - +0.1 852,062 - -0.1 852,162 - +0.3 852,165 + -0.3 852,174 - -0.3 852,211 + -0.1 852,283 + -0.9 852,291 - +0.0 852,298 + +0.1 852,301 - -0.6 852,301 - -1.1 852,301 - +0.3 852,306 - +0.1 852,427 + +0.3 852,462 - -1.3 852,490 - -0.2 852,490 - -2.5 852,621 + Atu0851 0.39 +0.0 852,656 + Atu0851 0.47 +0.9 852,664 - Atu0851 0.49 +0.2 852,716 + Atu0851 0.61 +0.2 852,769 + Atu0851 0.74 +0.3 852,806 + Atu0851 0.83 +0.2 852,810 - Atu0851 0.84 +1.1 852,825 - Atu0851 0.87 +0.7
Or see this region's nucleotide sequence