Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS23175 and ABID97_RS23180 are separated by 19 nucleotides ABID97_RS23180 and ABID97_RS23185 overlap by 4 nucleotides ABID97_RS23185 and ABID97_RS23190 are separated by 97 nucleotides ABID97_RS23190 and ABID97_RS23195 are separated by 4 nucleotides
ABID97_RS23175: ABID97_RS23175 - BolA family protein, at 4,791,556 to 4,791,798
_RS23175
ABID97_RS23180: ABID97_RS23180 - ABC transporter permease, at 4,791,818 to 4,792,582
_RS23180
ABID97_RS23185: ABID97_RS23185 - ABC transporter ATP-binding protein, at 4,792,579 to 4,793,526
_RS23185
ABID97_RS23190: ABID97_RS23190 - STAS domain-containing protein, at 4,793,624 to 4,793,896
_RS23190
ABID97_RS23195: ABID97_RS23195 - ABC transporter substrate-binding protein, at 4,793,901 to 4,794,560
_RS23195
Position (kb) 4792
4793
4794 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4791.651 kb on - strand, within ABID97_RS23175 at 4791.651 kb on - strand, within ABID97_RS23175 at 4791.834 kb on + strand at 4791.963 kb on + strand, within ABID97_RS23180 at 4791.963 kb on + strand, within ABID97_RS23180 at 4791.963 kb on + strand, within ABID97_RS23180 at 4792.023 kb on + strand, within ABID97_RS23180 at 4792.023 kb on + strand, within ABID97_RS23180 at 4792.263 kb on + strand, within ABID97_RS23180 at 4792.263 kb on + strand, within ABID97_RS23180 at 4792.263 kb on + strand, within ABID97_RS23180 at 4792.264 kb on - strand, within ABID97_RS23180 at 4792.416 kb on + strand, within ABID97_RS23180 at 4792.416 kb on + strand, within ABID97_RS23180 at 4792.417 kb on - strand, within ABID97_RS23180 at 4792.431 kb on + strand, within ABID97_RS23180 at 4792.431 kb on + strand, within ABID97_RS23180 at 4792.431 kb on + strand, within ABID97_RS23180 at 4792.432 kb on - strand, within ABID97_RS23180 at 4792.432 kb on - strand, within ABID97_RS23180 at 4792.548 kb on + strand at 4792.549 kb on - strand at 4792.549 kb on - strand at 4792.549 kb on - strand at 4792.922 kb on + strand, within ABID97_RS23185 at 4792.923 kb on - strand, within ABID97_RS23185 at 4793.187 kb on - strand, within ABID97_RS23185 at 4793.489 kb on + strand at 4793.489 kb on + strand at 4793.490 kb on - strand at 4793.810 kb on - strand, within ABID97_RS23190 at 4793.810 kb on - strand, within ABID97_RS23190 at 4793.998 kb on + strand, within ABID97_RS23195 at 4793.998 kb on + strand, within ABID97_RS23195 at 4793.999 kb on - strand, within ABID97_RS23195 at 4794.037 kb on + strand, within ABID97_RS23195 at 4794.037 kb on + strand, within ABID97_RS23195 at 4794.037 kb on + strand, within ABID97_RS23195 at 4794.037 kb on + strand, within ABID97_RS23195 at 4794.038 kb on - strand, within ABID97_RS23195 at 4794.038 kb on - strand, within ABID97_RS23195 at 4794.211 kb on + strand, within ABID97_RS23195 at 4794.212 kb on - strand, within ABID97_RS23195 at 4794.212 kb on - strand, within ABID97_RS23195 at 4794.212 kb on - strand, within ABID97_RS23195 at 4794.517 kb on - strand at 4794.517 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,791,651 - ABID97_RS23175 0.39 -0.3 4,791,651 - ABID97_RS23175 0.39 -0.7 4,791,834 + -0.4 4,791,963 + ABID97_RS23180 0.19 -0.2 4,791,963 + ABID97_RS23180 0.19 +0.3 4,791,963 + ABID97_RS23180 0.19 -0.0 4,792,023 + ABID97_RS23180 0.27 +0.1 4,792,023 + ABID97_RS23180 0.27 -0.4 4,792,263 + ABID97_RS23180 0.58 +1.8 4,792,263 + ABID97_RS23180 0.58 -0.4 4,792,263 + ABID97_RS23180 0.58 -0.9 4,792,264 - ABID97_RS23180 0.58 -0.4 4,792,416 + ABID97_RS23180 0.78 -0.6 4,792,416 + ABID97_RS23180 0.78 -0.0 4,792,417 - ABID97_RS23180 0.78 +0.1 4,792,431 + ABID97_RS23180 0.80 -0.0 4,792,431 + ABID97_RS23180 0.80 +0.3 4,792,431 + ABID97_RS23180 0.80 -0.1 4,792,432 - ABID97_RS23180 0.80 -2.3 4,792,432 - ABID97_RS23180 0.80 -0.4 4,792,548 + +0.6 4,792,549 - +0.7 4,792,549 - -0.5 4,792,549 - -0.6 4,792,922 + ABID97_RS23185 0.36 -0.0 4,792,923 - ABID97_RS23185 0.36 +1.0 4,793,187 - ABID97_RS23185 0.64 +0.1 4,793,489 + -0.2 4,793,489 + +0.2 4,793,490 - -0.2 4,793,810 - ABID97_RS23190 0.68 +0.6 4,793,810 - ABID97_RS23190 0.68 +0.2 4,793,998 + ABID97_RS23195 0.15 +0.7 4,793,998 + ABID97_RS23195 0.15 +0.3 4,793,999 - ABID97_RS23195 0.15 +0.1 4,794,037 + ABID97_RS23195 0.21 -0.3 4,794,037 + ABID97_RS23195 0.21 +0.1 4,794,037 + ABID97_RS23195 0.21 +0.8 4,794,037 + ABID97_RS23195 0.21 -0.1 4,794,038 - ABID97_RS23195 0.21 +0.9 4,794,038 - ABID97_RS23195 0.21 -0.4 4,794,211 + ABID97_RS23195 0.47 +0.2 4,794,212 - ABID97_RS23195 0.47 +0.1 4,794,212 - ABID97_RS23195 0.47 +0.2 4,794,212 - ABID97_RS23195 0.47 +0.9 4,794,517 - +0.2 4,794,517 - +0.4
Or see this region's nucleotide sequence