Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22770 and ABID97_RS22775 overlap by 1 nucleotides ABID97_RS22775 and ABID97_RS22780 are separated by 11 nucleotides ABID97_RS22780 and ABID97_RS22785 are separated by 47 nucleotides
ABID97_RS22770: ABID97_RS22770 - enoyl-CoA hydratase-related protein, at 4,715,522 to 4,716,325
_RS22770
ABID97_RS22775: ABID97_RS22775 - hydroxyphenylacetyl-CoA thioesterase PaaI, at 4,716,325 to 4,716,768
_RS22775
ABID97_RS22780: ABID97_RS22780 - phenylacetate--CoA ligase PaaK, at 4,716,780 to 4,718,096
_RS22780
ABID97_RS22785: ABID97_RS22785 - 1,2-phenylacetyl-CoA epoxidase subunit PaaA, at 4,718,144 to 4,719,157
_RS22785
Position (kb) 4716
4717
4718
4719 Strain fitness (log2 ratio) -1
0
1
2 at 4715.795 kb on + strand, within ABID97_RS22770 at 4715.795 kb on + strand, within ABID97_RS22770 at 4715.795 kb on + strand, within ABID97_RS22770 at 4715.796 kb on - strand, within ABID97_RS22770 at 4715.798 kb on + strand, within ABID97_RS22770 at 4715.798 kb on + strand, within ABID97_RS22770 at 4715.799 kb on - strand, within ABID97_RS22770 at 4715.799 kb on - strand, within ABID97_RS22770 at 4715.799 kb on - strand, within ABID97_RS22770 at 4716.364 kb on + strand at 4716.365 kb on - strand at 4716.673 kb on + strand, within ABID97_RS22775 at 4716.674 kb on - strand, within ABID97_RS22775 at 4716.733 kb on + strand at 4716.733 kb on + strand at 4716.733 kb on + strand at 4716.892 kb on - strand at 4717.014 kb on + strand, within ABID97_RS22780 at 4717.351 kb on - strand, within ABID97_RS22780 at 4717.351 kb on - strand, within ABID97_RS22780 at 4717.501 kb on - strand, within ABID97_RS22780 at 4717.501 kb on - strand, within ABID97_RS22780 at 4717.860 kb on + strand, within ABID97_RS22780 at 4718.147 kb on + strand at 4718.147 kb on + strand at 4718.147 kb on + strand at 4718.147 kb on + strand at 4718.535 kb on - strand, within ABID97_RS22785 at 4718.711 kb on + strand, within ABID97_RS22785
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,715,795 + ABID97_RS22770 0.34 +0.2 4,715,795 + ABID97_RS22770 0.34 -0.9 4,715,795 + ABID97_RS22770 0.34 +0.0 4,715,796 - ABID97_RS22770 0.34 +0.2 4,715,798 + ABID97_RS22770 0.34 -0.0 4,715,798 + ABID97_RS22770 0.34 -0.5 4,715,799 - ABID97_RS22770 0.34 -0.2 4,715,799 - ABID97_RS22770 0.34 +0.4 4,715,799 - ABID97_RS22770 0.34 +0.1 4,716,364 + -0.6 4,716,365 - -0.4 4,716,673 + ABID97_RS22775 0.78 -0.2 4,716,674 - ABID97_RS22775 0.79 +0.3 4,716,733 + +0.1 4,716,733 + +0.3 4,716,733 + -0.7 4,716,892 - +0.2 4,717,014 + ABID97_RS22780 0.18 +0.8 4,717,351 - ABID97_RS22780 0.43 +1.6 4,717,351 - ABID97_RS22780 0.43 +1.8 4,717,501 - ABID97_RS22780 0.55 +0.2 4,717,501 - ABID97_RS22780 0.55 -0.4 4,717,860 + ABID97_RS22780 0.82 +0.8 4,718,147 + -0.1 4,718,147 + -0.4 4,718,147 + -0.2 4,718,147 + -0.0 4,718,535 - ABID97_RS22785 0.39 -0.3 4,718,711 + ABID97_RS22785 0.56 -0.2
Or see this region's nucleotide sequence