Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21670 and ABID97_RS21675 are separated by 74 nucleotides ABID97_RS21675 and ABID97_RS21680 overlap by 1 nucleotides ABID97_RS21680 and ABID97_RS21685 are separated by 44 nucleotides ABID97_RS21685 and ABID97_RS21690 are separated by 7 nucleotides
ABID97_RS21670: ABID97_RS21670 - argininosuccinate synthase, at 4,482,194 to 4,483,534
_RS21670
ABID97_RS21675: ABID97_RS21675 - hypothetical protein, at 4,483,609 to 4,484,448
_RS21675
ABID97_RS21680: ABID97_RS21680 - UDP-N-acetylmuramate dehydrogenase, at 4,484,448 to 4,485,500
_RS21680
ABID97_RS21685: ABID97_RS21685 - YajQ family cyclic di-GMP-binding protein, at 4,485,545 to 4,486,030
_RS21685
ABID97_RS21690: ABID97_RS21690 - retropepsin-like aspartic protease, at 4,486,038 to 4,486,679
_RS21690
Position (kb) 4484
4485
4486 Strain fitness (log2 ratio) -1
0
1 at 4483.532 kb on + strand at 4483.829 kb on + strand, within ABID97_RS21675 at 4483.829 kb on + strand, within ABID97_RS21675 at 4484.176 kb on - strand, within ABID97_RS21675 at 4484.176 kb on - strand, within ABID97_RS21675 at 4484.270 kb on + strand, within ABID97_RS21675 at 4484.270 kb on + strand, within ABID97_RS21675 at 4484.271 kb on - strand, within ABID97_RS21675 at 4484.271 kb on - strand, within ABID97_RS21675 at 4486.458 kb on + strand, within ABID97_RS21690 at 4486.458 kb on + strand, within ABID97_RS21690 at 4486.459 kb on - strand, within ABID97_RS21690 at 4486.459 kb on - strand, within ABID97_RS21690 at 4486.459 kb on - strand, within ABID97_RS21690
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,483,532 + -0.2 4,483,829 + ABID97_RS21675 0.26 -0.5 4,483,829 + ABID97_RS21675 0.26 -0.5 4,484,176 - ABID97_RS21675 0.68 -0.2 4,484,176 - ABID97_RS21675 0.68 -0.6 4,484,270 + ABID97_RS21675 0.79 -1.0 4,484,270 + ABID97_RS21675 0.79 -0.1 4,484,271 - ABID97_RS21675 0.79 -0.2 4,484,271 - ABID97_RS21675 0.79 -0.5 4,486,458 + ABID97_RS21690 0.65 -0.5 4,486,458 + ABID97_RS21690 0.65 -0.5 4,486,459 - ABID97_RS21690 0.66 -0.6 4,486,459 - ABID97_RS21690 0.66 -0.1 4,486,459 - ABID97_RS21690 0.66 -0.3
Or see this region's nucleotide sequence