Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14305 and ABID97_RS14310 overlap by 2 nucleotides ABID97_RS14310 and ABID97_RS14315 overlap by 4 nucleotides ABID97_RS14315 and ABID97_RS14320 are separated by 33 nucleotides ABID97_RS14320 and ABID97_RS14325 are separated by 10 nucleotides
ABID97_RS14305: ABID97_RS14305 - arylesterase, at 2,974,281 to 2,974,961
_RS14305
ABID97_RS14310: ABID97_RS14310 - ATP-binding cassette domain-containing protein, at 2,974,960 to 2,975,682
_RS14310
ABID97_RS14315: ABID97_RS14315 - hypothetical protein, at 2,975,679 to 2,976,659
_RS14315
ABID97_RS14320: ABID97_RS14320 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 2,976,693 to 2,977,439
_RS14320
ABID97_RS14325: ABID97_RS14325 - NAD(P)/FAD-dependent oxidoreductase, at 2,977,450 to 2,978,655
_RS14325
Position (kb)
2975
2976
2977 Strain fitness (log2 ratio)
-1
0
1 at 2974.925 kb on + strand at 2974.925 kb on + strand at 2974.925 kb on + strand at 2974.926 kb on - strand at 2975.874 kb on + strand, within ABID97_RS14315 at 2975.874 kb on + strand, within ABID97_RS14315 at 2975.875 kb on - strand, within ABID97_RS14315 at 2975.875 kb on - strand, within ABID97_RS14315 at 2976.363 kb on + strand, within ABID97_RS14315 at 2976.363 kb on + strand, within ABID97_RS14315 at 2976.364 kb on - strand, within ABID97_RS14315 at 2976.364 kb on - strand, within ABID97_RS14315 at 2976.552 kb on + strand, within ABID97_RS14315 at 2976.552 kb on + strand, within ABID97_RS14315 at 2976.684 kb on - strand at 2977.155 kb on + strand, within ABID97_RS14320 at 2977.155 kb on + strand, within ABID97_RS14320 at 2977.156 kb on - strand, within ABID97_RS14320 at 2977.251 kb on + strand, within ABID97_RS14320 at 2977.410 kb on + strand at 2977.411 kb on - strand at 2977.411 kb on - strand at 2977.452 kb on - strand at 2977.487 kb on + strand at 2977.487 kb on + strand at 2977.487 kb on + strand at 2977.488 kb on - strand at 2977.488 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 2,974,925 + -0.3 2,974,925 + -0.3 2,974,925 + -0.4 2,974,926 - -0.2 2,975,874 + ABID97_RS14315 0.20 -1.4 2,975,874 + ABID97_RS14315 0.20 +0.1 2,975,875 - ABID97_RS14315 0.20 -0.4 2,975,875 - ABID97_RS14315 0.20 -0.2 2,976,363 + ABID97_RS14315 0.70 -0.1 2,976,363 + ABID97_RS14315 0.70 +0.2 2,976,364 - ABID97_RS14315 0.70 +0.1 2,976,364 - ABID97_RS14315 0.70 +0.6 2,976,552 + ABID97_RS14315 0.89 -0.4 2,976,552 + ABID97_RS14315 0.89 -1.0 2,976,684 - +0.7 2,977,155 + ABID97_RS14320 0.62 +1.1 2,977,155 + ABID97_RS14320 0.62 +1.6 2,977,156 - ABID97_RS14320 0.62 +0.2 2,977,251 + ABID97_RS14320 0.75 -0.7 2,977,410 + +0.2 2,977,411 - +0.5 2,977,411 - +0.1 2,977,452 - -0.3 2,977,487 + +0.0 2,977,487 + +0.3 2,977,487 + +0.6 2,977,488 - -0.0 2,977,488 - -0.3
Or see this region's nucleotide sequence