Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02230 and ABID97_RS02235 are separated by 27 nucleotides ABID97_RS02235 and ABID97_RS02240 are separated by 93 nucleotides ABID97_RS02240 and ABID97_RS02245 are separated by 10 nucleotides
ABID97_RS02230: ABID97_RS02230 - Stp1/IreP family PP2C-type Ser/Thr phosphatase, at 451,823 to 452,629
_RS02230
ABID97_RS02235: ABID97_RS02235 - TerC family protein, at 452,657 to 453,343
_RS02235
ABID97_RS02240: ABID97_RS02240 - succinate--CoA ligase subunit alpha, at 453,437 to 454,330
_RS02240
ABID97_RS02245: ABID97_RS02245 - ADP-forming succinate--CoA ligase subunit beta, at 454,341 to 455,507
_RS02245
Position (kb) 453
454
455 Strain fitness (log2 ratio) -1
0
1
2 at 452.469 kb on + strand, within ABID97_RS02230 at 452.469 kb on + strand, within ABID97_RS02230 at 452.469 kb on + strand, within ABID97_RS02230 at 452.469 kb on + strand, within ABID97_RS02230 at 452.469 kb on + strand, within ABID97_RS02230 at 452.470 kb on - strand, within ABID97_RS02230 at 452.470 kb on - strand, within ABID97_RS02230 at 452.470 kb on - strand, within ABID97_RS02230 at 452.549 kb on - strand at 452.574 kb on + strand at 452.575 kb on - strand at 452.575 kb on - strand at 452.742 kb on + strand, within ABID97_RS02235 at 452.742 kb on + strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.743 kb on - strand, within ABID97_RS02235 at 452.882 kb on - strand, within ABID97_RS02235 at 453.036 kb on + strand, within ABID97_RS02235 at 453.037 kb on - strand, within ABID97_RS02235 at 453.037 kb on - strand, within ABID97_RS02235 at 453.126 kb on + strand, within ABID97_RS02235 at 453.126 kb on + strand, within ABID97_RS02235 at 453.127 kb on - strand, within ABID97_RS02235 at 453.127 kb on - strand, within ABID97_RS02235 at 453.365 kb on + strand at 453.366 kb on - strand at 453.366 kb on - strand at 453.366 kb on - strand at 453.404 kb on - strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.438 kb on + strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 453.439 kb on - strand at 454.342 kb on + strand at 454.343 kb on - strand at 454.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 452,469 + ABID97_RS02230 0.80 +0.5 452,469 + ABID97_RS02230 0.80 +0.6 452,469 + ABID97_RS02230 0.80 +0.6 452,469 + ABID97_RS02230 0.80 +0.5 452,469 + ABID97_RS02230 0.80 +0.8 452,470 - ABID97_RS02230 0.80 +0.7 452,470 - ABID97_RS02230 0.80 +0.5 452,470 - ABID97_RS02230 0.80 +0.6 452,549 - +1.0 452,574 + +0.6 452,575 - +0.7 452,575 - +1.0 452,742 + ABID97_RS02235 0.12 -0.2 452,742 + ABID97_RS02235 0.12 +0.1 452,743 - ABID97_RS02235 0.13 +0.1 452,743 - ABID97_RS02235 0.13 +1.0 452,743 - ABID97_RS02235 0.13 +0.9 452,743 - ABID97_RS02235 0.13 +1.2 452,743 - ABID97_RS02235 0.13 +0.0 452,743 - ABID97_RS02235 0.13 +0.9 452,743 - ABID97_RS02235 0.13 +2.1 452,882 - ABID97_RS02235 0.33 -0.6 453,036 + ABID97_RS02235 0.55 +0.5 453,037 - ABID97_RS02235 0.55 -0.2 453,037 - ABID97_RS02235 0.55 -0.4 453,126 + ABID97_RS02235 0.68 +0.1 453,126 + ABID97_RS02235 0.68 -0.2 453,127 - ABID97_RS02235 0.68 -0.1 453,127 - ABID97_RS02235 0.68 +0.1 453,365 + +0.2 453,366 - +0.1 453,366 - -0.0 453,366 - -0.7 453,404 - +0.2 453,438 + +0.5 453,438 + +0.2 453,438 + +0.0 453,438 + +0.2 453,438 + +0.2 453,438 + +0.2 453,438 + +0.4 453,438 + +0.3 453,439 - +1.2 453,439 - -0.2 453,439 - +0.2 453,439 - -0.4 453,439 - -0.3 453,439 - -0.1 453,439 - -0.5 453,439 - -0.1 454,342 + +1.7 454,343 - +0.3 454,343 - -0.2
Or see this region's nucleotide sequence