Strain Fitness in Escherichia coli BW25113 around b1815
Experiment: Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,895,465 | + | sdaA | b1814 | 0.37 | -0.7 |
| 1,895,498 | - | sdaA | b1814 | 0.40 | +0.8 |
| 1,895,540 | - | sdaA | b1814 | 0.43 | -0.8 |
| 1,895,646 | - | sdaA | b1814 | 0.51 | -1.6 |
| 1,895,646 | - | sdaA | b1814 | 0.51 | -0.0 |
| 1,896,004 | - | sdaA | b1814 | 0.77 | -0.9 |
| 1,896,004 | - | sdaA | b1814 | 0.77 | +1.1 |
| 1,896,254 | + | +1.7 | |||
| 1,896,386 | - | +0.3 | |||
| 1,896,440 | - | -0.0 | |||
| 1,896,440 | - | -0.2 | |||
| 1,896,564 | + | -0.2 | |||
| 1,896,618 | - | b1815 | b1815 | 0.10 | +1.4 |
| 1,896,650 | + | b1815 | b1815 | 0.12 | +0.9 |
| 1,896,681 | + | b1815 | b1815 | 0.14 | +1.0 |
| 1,896,681 | + | b1815 | b1815 | 0.14 | +0.4 |
| 1,896,686 | + | b1815 | b1815 | 0.15 | +1.0 |
| 1,896,770 | - | b1815 | b1815 | 0.20 | -0.1 |
| 1,896,770 | - | b1815 | b1815 | 0.20 | -0.3 |
| 1,896,929 | + | b1815 | b1815 | 0.30 | +0.8 |
| 1,896,956 | - | b1815 | b1815 | 0.32 | +2.5 |
| 1,897,151 | - | b1815 | b1815 | 0.44 | -0.4 |
| 1,897,353 | - | b1815 | b1815 | 0.56 | +0.4 |
| 1,897,505 | - | b1815 | b1815 | 0.66 | -0.2 |
| 1,897,505 | - | b1815 | b1815 | 0.66 | +1.8 |
| 1,897,514 | - | b1815 | b1815 | 0.66 | +0.9 |
| 1,897,514 | - | b1815 | b1815 | 0.66 | -1.8 |
| 1,897,543 | - | b1815 | b1815 | 0.68 | +1.2 |
| 1,897,597 | + | b1815 | b1815 | 0.72 | +1.4 |
| 1,898,074 | + | +1.0 | |||
| 1,898,454 | - | yoaE | b1816 | 0.26 | -0.5 |
| 1,898,667 | + | yoaE | b1816 | 0.39 | -0.0 |
| 1,898,794 | - | yoaE | b1816 | 0.48 | +1.1 |
| 1,898,843 | + | yoaE | b1816 | 0.51 | +1.4 |
| 1,898,864 | + | yoaE | b1816 | 0.52 | -1.1 |
| 1,898,914 | - | yoaE | b1816 | 0.55 | -0.4 |
| 1,898,925 | + | yoaE | b1816 | 0.56 | -0.3 |
| 1,898,932 | - | yoaE | b1816 | 0.56 | +0.1 |
| 1,898,932 | - | yoaE | b1816 | 0.56 | -0.1 |
| 1,899,020 | - | yoaE | b1816 | 0.62 | +1.4 |
| 1,899,020 | - | yoaE | b1816 | 0.62 | +1.4 |
Or see this region's nucleotide sequence