Strain Fitness in Escherichia coli BW25113 around b0792
Experiment: Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
823,296 | - | ybhP | b0790 | 0.44 | -0.7 |
823,296 | - | ybhP | b0790 | 0.44 | -1.4 |
823,302 | - | ybhP | b0790 | 0.45 | -1.1 |
823,331 | + | ybhP | b0790 | 0.49 | +0.1 |
823,346 | + | ybhP | b0790 | 0.51 | +0.7 |
823,405 | + | ybhP | b0790 | 0.59 | +0.4 |
823,434 | - | ybhP | b0790 | 0.62 | -0.3 |
823,454 | - | ybhP | b0790 | 0.65 | +0.5 |
823,604 | - | ybhP | b0790 | 0.85 | -0.8 |
823,653 | - | -0.1 | |||
823,850 | + | -1.1 | |||
823,893 | - | +0.6 | |||
823,947 | + | ybhQ | b0791 | 0.23 | +0.4 |
823,961 | - | ybhQ | b0791 | 0.26 | +0.6 |
823,993 | + | ybhQ | b0791 | 0.34 | -0.4 |
824,064 | - | ybhQ | b0791 | 0.51 | -0.8 |
824,068 | + | ybhQ | b0791 | 0.52 | +0.2 |
824,288 | - | +0.3 | |||
824,354 | + | ybhR | b0792 | 0.12 | -1.0 |
824,354 | + | ybhR | b0792 | 0.12 | -1.4 |
824,371 | - | ybhR | b0792 | 0.13 | +0.2 |
824,371 | - | ybhR | b0792 | 0.13 | -0.2 |
824,501 | + | ybhR | b0792 | 0.25 | -1.0 |
824,559 | + | ybhR | b0792 | 0.30 | -0.3 |
824,621 | - | ybhR | b0792 | 0.36 | -1.1 |
824,689 | - | ybhR | b0792 | 0.42 | +0.6 |
824,788 | - | ybhR | b0792 | 0.51 | -0.4 |
825,226 | + | +0.9 | |||
825,315 | - | +0.1 | |||
825,372 | + | -0.0 | |||
825,609 | - | ybhS | b0793 | 0.24 | +0.3 |
825,609 | - | ybhS | b0793 | 0.24 | +1.3 |
825,609 | - | ybhS | b0793 | 0.24 | -1.2 |
825,645 | + | ybhS | b0793 | 0.27 | -1.6 |
825,662 | + | ybhS | b0793 | 0.28 | +0.5 |
825,736 | + | ybhS | b0793 | 0.35 | +0.3 |
825,742 | - | ybhS | b0793 | 0.35 | -0.1 |
825,808 | + | ybhS | b0793 | 0.41 | -0.4 |
825,834 | + | ybhS | b0793 | 0.43 | +0.3 |
825,834 | - | ybhS | b0793 | 0.43 | -0.9 |
825,895 | + | ybhS | b0793 | 0.49 | +0.6 |
825,895 | + | ybhS | b0793 | 0.49 | -0.4 |
826,064 | - | ybhS | b0793 | 0.64 | +0.7 |
826,064 | - | ybhS | b0793 | 0.64 | -0.4 |
826,131 | + | ybhS | b0793 | 0.70 | -1.3 |
826,137 | - | ybhS | b0793 | 0.70 | -0.2 |
826,137 | - | ybhS | b0793 | 0.70 | +0.0 |
Or see this region's nucleotide sequence