Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4562

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,458,970	+		Echvi_4560	0.49	+0.3
5,458,970	+		Echvi_4560	0.49	+1.3
5,458,970	+		Echvi_4560	0.49	-1.0
5,458,971	-		Echvi_4560	0.49	+1.8
5,458,971	-		Echvi_4560	0.49	-0.8
5,458,971	-		Echvi_4560	0.49	+1.0
5,458,978	-		Echvi_4560	0.50	+0.4
5,458,991	+		Echvi_4560	0.52	+0.2
5,458,991	+		Echvi_4560	0.52	-0.9
5,459,127	+		Echvi_4560	0.72	-0.5
5,459,127	+		Echvi_4560	0.72	+0.8
5,459,128	-		Echvi_4560	0.72	+0.0
5,459,128	-		Echvi_4560	0.72	-0.3
5,459,278	+				-1.6
5,459,278	+				+1.2
5,459,278	+				+0.2
5,459,279	-				-0.4
5,459,385	-				+0.4
5,459,471	-				-2.1
5,459,522	+				-0.1
5,459,523	-				-1.5
5,459,624	+				+1.5
5,459,625	-				+0.4
5,459,689	+				+0.3
5,459,689	+				+0.0
5,459,690	-				+1.8
5,459,690	-				+0.6
5,459,690	-				-0.1
5,459,692	+				-0.7
5,459,692	+				-0.1
5,459,714	+				-0.0
5,459,715	-				+1.6
5,459,715	-				+1.4
5,459,715	-				-0.7
5,459,719	+				-0.9
5,459,719	+				-1.4
5,459,726	+				-0.2
5,459,726	+				-0.7
5,459,727	-				-0.1
5,459,727	-				-1.9
5,459,727	-				+1.0
5,459,730	-				+0.6
5,459,821	+		Echvi_4561	0.33	+0.0
5,459,852	-		Echvi_4561	0.49	+0.5
5,459,895	-		Echvi_4561	0.71	+0.1
5,459,922	+				-0.5
5,459,922	+				-0.8
5,459,923	-				-0.7
5,459,948	+				-0.7
5,459,948	+				-0.2
5,459,953	+				+0.5
5,459,953	+				-0.4
5,459,954	-				+0.8
5,459,954	-				+1.6
5,459,957	-				+0.2
5,460,076	+		Echvi_4562	0.24	-0.5
5,460,077	-		Echvi_4562	0.24	+0.4
5,460,347	+		Echvi_4562	0.60	+0.4
5,460,347	+		Echvi_4562	0.60	-0.0
5,460,348	-		Echvi_4562	0.61	-1.3
5,460,348	-		Echvi_4562	0.61	+1.6
5,460,410	-		Echvi_4562	0.69	-0.4
5,460,563	-		Echvi_4562	0.90	+0.4
5,460,623	-				+0.4
5,460,626	+				+0.1
5,460,627	-				-1.0
5,460,627	-				+0.8
5,460,638	-				+0.5
5,460,663	+				-0.2
5,460,664	-				+1.4
5,460,664	-				+0.9
5,460,705	+				-0.7
5,460,706	-				-1.0
5,460,720	+				-0.2
5,460,721	-				-0.4
5,460,753	+				-0.5
5,460,753	+				-0.1
5,460,753	+				-0.1
5,460,754	-				+0.4
5,460,854	+				+0.6
5,460,854	+				-0.3
5,460,916	+				+2.0
5,460,916	+				+1.4
5,460,916	+				+1.0
5,460,917	-				-0.7
5,460,917	-				+0.1
5,460,917	-				-0.2
5,461,120	+		Echvi_4563	0.16	+1.0
5,461,121	-		Echvi_4563	0.16	-0.8
5,461,139	+		Echvi_4563	0.18	+1.0
5,461,282	+		Echvi_4563	0.26	+0.0
5,461,294	+		Echvi_4563	0.27	+0.1
5,461,294	+		Echvi_4563	0.27	-0.2
5,461,295	-		Echvi_4563	0.27	+0.1
5,461,295	-		Echvi_4563	0.27	+0.3
5,461,295	-		Echvi_4563	0.27	-1.4
5,461,297	+		Echvi_4563	0.27	-0.4
5,461,297	+		Echvi_4563	0.27	-1.0
5,461,297	+		Echvi_4563	0.27	-0.3
5,461,313	+		Echvi_4563	0.28	+1.2
5,461,313	+		Echvi_4563	0.28	+0.0
5,461,384	+		Echvi_4563	0.32	+0.6
5,461,385	-		Echvi_4563	0.32	-0.1
5,461,388	+		Echvi_4563	0.32	-0.0
5,461,438	+		Echvi_4563	0.35	+0.0
5,461,594	+		Echvi_4563	0.45	-0.2
5,461,594	+		Echvi_4563	0.45	-1.2
5,461,594	+		Echvi_4563	0.45	-0.3
5,461,595	-		Echvi_4563	0.45	+0.7
5,461,637	+		Echvi_4563	0.47	+1.3