Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4484

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,361,761	+				-0.5
5,361,762	-				+0.5
5,361,763	+				-0.1
5,361,763	+				-0.6
5,361,763	+				-0.1
5,361,764	-				+0.3
5,361,777	-		Echvi_4482	0.10	-0.0
5,361,796	-		Echvi_4482	0.16	+0.1
5,361,836	+		Echvi_4482	0.28	-0.4
5,361,905	-		Echvi_4482	0.48	+0.3
5,361,905	-		Echvi_4482	0.48	-0.4
5,361,924	+		Echvi_4482	0.54	-0.1
5,361,924	+		Echvi_4482	0.54	-0.3
5,361,982	-		Echvi_4482	0.71	+0.2
5,361,982	-		Echvi_4482	0.71	+0.4
5,361,982	-		Echvi_4482	0.71	+1.2
5,362,015	-		Echvi_4482	0.81	-0.5
5,362,021	+		Echvi_4482	0.82	+0.8
5,362,021	+		Echvi_4482	0.82	+1.3
5,362,021	+		Echvi_4482	0.82	-0.2
5,362,022	-		Echvi_4482	0.83	-0.2
5,362,022	-		Echvi_4482	0.83	-0.7
5,362,087	-				-0.9
5,362,132	+				-0.8
5,362,134	+				-0.6
5,362,134	+				+0.2
5,362,141	+				-0.8
5,362,141	+				+1.5
5,362,141	+				-1.3
5,362,179	-		Echvi_4483	0.14	+1.4
5,362,210	+		Echvi_4483	0.19	+0.6
5,362,211	-		Echvi_4483	0.19	-0.4
5,362,253	-		Echvi_4483	0.26	-0.7
5,362,272	-		Echvi_4483	0.29	+1.1
5,362,331	-		Echvi_4483	0.38	+1.1
5,362,352	-		Echvi_4483	0.41	+0.3
5,362,551	-		Echvi_4483	0.71	-0.5
5,362,571	+		Echvi_4483	0.74	+0.1
5,362,571	+		Echvi_4483	0.74	-0.9
5,362,572	-		Echvi_4483	0.74	-0.9
5,362,575	+		Echvi_4483	0.75	-0.2
5,362,655	-		Echvi_4483	0.87	+0.5
5,362,673	-				+0.2
5,362,682	+				+1.1
5,362,683	-				+0.3
5,362,715	-				+0.0
5,362,759	-				-0.2
5,362,761	+				+0.4
5,362,762	-				+1.3
5,362,762	-				-0.0
5,362,764	+				-0.6
5,362,764	+				-1.2
5,362,767	+				-1.2
5,362,783	+		Echvi_4484	0.13	-0.4
5,362,783	+		Echvi_4484	0.13	+1.2
5,362,784	-		Echvi_4484	0.13	-1.0
5,362,793	-		Echvi_4484	0.15	-0.1
5,362,803	+		Echvi_4484	0.18	-0.7
5,362,819	-		Echvi_4484	0.22	-0.2
5,362,823	+		Echvi_4484	0.23	-0.9
5,362,823	+		Echvi_4484	0.23	-0.3
5,362,883	-		Echvi_4484	0.39	-1.3
5,362,909	+		Echvi_4484	0.46	+0.2
5,362,909	+		Echvi_4484	0.46	+0.6
5,362,909	+		Echvi_4484	0.46	-0.5
5,362,910	-		Echvi_4484	0.46	-1.1
5,362,910	-		Echvi_4484	0.46	-0.3
5,362,911	+		Echvi_4484	0.47	-0.7
5,362,911	+		Echvi_4484	0.47	+0.0
5,362,912	-		Echvi_4484	0.47	-0.2
5,362,921	-		Echvi_4484	0.49	+1.2
5,362,956	+		Echvi_4484	0.58	-1.0
5,363,098	-				-0.1
5,363,103	+				-0.2
5,363,103	+				-0.5
5,363,212	+				-0.9
5,363,212	+				+0.3
5,363,212	+				+2.3
5,363,212	+				-1.8
5,363,212	+				-0.7
5,363,213	-				-0.9
5,363,213	-				-0.4
5,363,213	-				-0.4
5,363,233	+				+1.2
5,363,299	+				-0.5
5,363,394	+		Echvi_4485	0.12	-1.4
5,363,470	+		Echvi_4485	0.38	-0.0
5,363,471	-		Echvi_4485	0.38	-0.3
5,363,516	+		Echvi_4485	0.54	-0.7
5,363,537	-		Echvi_4485	0.61	-0.8
5,363,537	-		Echvi_4485	0.61	+0.8
5,363,573	+		Echvi_4485	0.73	-0.8
5,363,573	+		Echvi_4485	0.73	+1.6
5,363,574	-		Echvi_4485	0.73	-0.9
5,363,656	-				-0.5
5,363,656	-				-0.4
5,363,775	+				+0.4
5,363,776	-				+0.3
5,363,776	-				+0.7
5,363,776	-				-0.7
5,363,871	-				+0.7
5,363,906	+		Echvi_4486	0.10	+0.2
5,363,909	+		Echvi_4486	0.10	+0.2
5,363,909	+		Echvi_4486	0.10	-0.9
5,363,910	-		Echvi_4486	0.10	+0.4
5,363,910	-		Echvi_4486	0.10	+1.1
5,363,915	+		Echvi_4486	0.11	-1.7
5,363,916	-		Echvi_4486	0.11	+0.6
5,363,916	-		Echvi_4486	0.11	+0.3
5,363,931	+		Echvi_4486	0.12	+1.1
5,363,937	+		Echvi_4486	0.13	-0.9
5,363,959	+		Echvi_4486	0.15	+0.3
5,364,003	+		Echvi_4486	0.18	-1.9
5,364,006	+		Echvi_4486	0.18	+0.9
5,364,050	-		Echvi_4486	0.22	+0.2
5,364,060	+		Echvi_4486	0.23	-0.0
5,364,060	+		Echvi_4486	0.23	-0.3
5,364,070	-		Echvi_4486	0.24	-0.0
5,364,070	-		Echvi_4486	0.24	+0.0
5,364,075	+		Echvi_4486	0.24	-0.8
5,364,076	-		Echvi_4486	0.24	-0.1
5,364,077	+		Echvi_4486	0.24	+0.3
5,364,077	+		Echvi_4486	0.24	+0.8
5,364,077	+		Echvi_4486	0.24	-0.4
5,364,078	-		Echvi_4486	0.24	-0.3
5,364,078	-		Echvi_4486	0.24	+0.8