Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4396

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,255,363	-				-0.7
5,255,369	-				-0.7
5,255,369	-				-1.2
5,255,552	-		Echvi_4396	0.11	-2.9
5,255,612	-		Echvi_4396	0.17	-1.7
5,255,644	-		Echvi_4396	0.19	+0.3
5,255,644	-		Echvi_4396	0.19	-2.3
5,255,663	-		Echvi_4396	0.21	-1.4
5,255,683	-		Echvi_4396	0.23	-2.6
5,255,765	-		Echvi_4396	0.30	-1.5
5,255,765	-		Echvi_4396	0.30	-1.4
5,255,839	-		Echvi_4396	0.36	-2.2
5,255,841	-		Echvi_4396	0.36	-2.6
5,255,841	-		Echvi_4396	0.36	+0.1
5,255,860	-		Echvi_4396	0.38	-2.0
5,255,889	+		Echvi_4396	0.41	+2.3
5,255,893	-		Echvi_4396	0.41	-2.7
5,255,914	+		Echvi_4396	0.43	-0.0
5,255,941	+		Echvi_4396	0.45	+0.6
5,255,942	-		Echvi_4396	0.45	-1.6
5,255,948	-		Echvi_4396	0.46	-2.3
5,255,956	-		Echvi_4396	0.46	-3.2
5,255,961	-		Echvi_4396	0.47	-1.1
5,255,961	-		Echvi_4396	0.47	-2.0
5,255,961	-		Echvi_4396	0.47	-1.5
5,255,986	-		Echvi_4396	0.49	-1.5
5,256,021	-		Echvi_4396	0.52	-1.1
5,256,021	-		Echvi_4396	0.52	-3.1
5,256,027	+		Echvi_4396	0.53	+1.3
5,256,028	-		Echvi_4396	0.53	+0.1
5,256,028	-		Echvi_4396	0.53	-2.3
5,256,073	-		Echvi_4396	0.56	-1.5
5,256,073	-		Echvi_4396	0.56	-1.8
5,256,116	-		Echvi_4396	0.60	-0.9
5,256,131	-		Echvi_4396	0.61	-1.7
5,256,185	-		Echvi_4396	0.66	-2.3
5,256,185	-		Echvi_4396	0.66	-2.7
5,256,185	-		Echvi_4396	0.66	-2.5
5,256,188	-		Echvi_4396	0.66	-1.8
5,256,250	+		Echvi_4396	0.72	-1.6
5,256,253	-		Echvi_4396	0.72	-1.2
5,256,300	-		Echvi_4396	0.76	-2.5
5,256,303	-		Echvi_4396	0.76	-1.5
5,256,319	+		Echvi_4396	0.78	-0.6
5,256,319	+		Echvi_4396	0.78	+1.7
5,256,392	-		Echvi_4396	0.84	-1.6
5,256,392	-		Echvi_4396	0.84	-2.1
5,256,443	-		Echvi_4396	0.88	-1.4
5,256,490	-				-2.0
5,256,493	-				+0.9
5,256,495	-				-2.3
5,256,495	-				-0.2
5,256,495	-				+1.7
5,256,495	-				-0.9
5,256,495	-				-3.0
5,256,495	-				-2.0
5,256,495	-				-2.7
5,256,495	-				-3.2
5,256,495	-				-1.9
5,256,495	-				-1.9
5,256,495	-				-1.5
5,256,495	-				-2.6
5,256,495	-				-2.3
5,256,499	-				-2.6
5,256,509	-				-0.8
5,256,529	+				-0.4
5,256,530	-				-1.5
5,256,530	-				-3.4
5,256,567	-				-2.8
5,256,666	-		Echvi_4397	0.10	-2.5
5,256,675	-		Echvi_4397	0.11	-2.3
5,256,688	+		Echvi_4397	0.13	+0.1
5,256,705	-		Echvi_4397	0.14	-1.6
5,256,738	-		Echvi_4397	0.18	-3.4
5,256,738	-		Echvi_4397	0.18	-3.1
5,256,738	-		Echvi_4397	0.18	-2.3
5,256,786	-		Echvi_4397	0.23	-1.6
5,256,865	-		Echvi_4397	0.31	-1.0
5,256,865	-		Echvi_4397	0.31	-1.8
5,256,869	-		Echvi_4397	0.32	-2.8
5,256,869	-		Echvi_4397	0.32	-0.6
5,256,887	-		Echvi_4397	0.34	-0.1
5,256,887	-		Echvi_4397	0.34	-1.9
5,256,950	-		Echvi_4397	0.40	-1.3
5,256,965	-		Echvi_4397	0.42	-2.3
5,257,058	-		Echvi_4397	0.52	-1.4
5,257,060	-		Echvi_4397	0.52	-2.8
5,257,060	-		Echvi_4397	0.52	-2.4
5,257,092	-		Echvi_4397	0.55	-2.7
5,257,099	-		Echvi_4397	0.56	-0.2
5,257,118	+		Echvi_4397	0.58	-0.3
5,257,119	-		Echvi_4397	0.58	-2.2
5,257,134	-		Echvi_4397	0.60	-2.4
5,257,174	-		Echvi_4397	0.64	+1.7
5,257,176	-		Echvi_4397	0.64	-1.9
5,257,176	-		Echvi_4397	0.64	-2.5
5,257,176	-		Echvi_4397	0.64	-2.9
5,257,176	-		Echvi_4397	0.64	-3.4
5,257,187	-		Echvi_4397	0.65	-1.6
5,257,299	-		Echvi_4397	0.77	-4.9
5,257,329	-		Echvi_4397	0.80	-2.1
5,257,357	-		Echvi_4397	0.83	+0.1
5,257,357	-		Echvi_4397	0.83	-2.0
5,257,363	-		Echvi_4397	0.84	-1.4
5,257,363	-		Echvi_4397	0.84	-2.9
5,257,364	+		Echvi_4397	0.84	+0.7
5,257,376	-		Echvi_4397	0.85	-3.2
5,257,397	-		Echvi_4397	0.87	-1.4
5,257,397	-		Echvi_4397	0.87	-3.5
5,257,420	-		Echvi_4397	0.90	-2.8
5,257,488	-				-2.3
5,257,505	-				-2.0