Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4359

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,214,824	-				+0.1
5,214,959	+				+0.3
5,215,065	+				+1.6
5,215,066	-				+0.4
5,215,068	+				+0.0
5,215,202	+		Echvi_4358	0.20	+1.4
5,215,202	+		Echvi_4358	0.20	+1.2
5,215,336	+		Echvi_4358	0.41	-0.1
5,215,336	+		Echvi_4358	0.41	+0.6
5,215,336	+		Echvi_4358	0.41	+0.2
5,215,553	-		Echvi_4358	0.77	+1.0
5,215,553	-		Echvi_4358	0.77	+0.4
5,215,617	+		Echvi_4358	0.87	+3.3
5,215,617	+		Echvi_4358	0.87	-0.1
5,215,618	-		Echvi_4358	0.87	+1.0
5,215,674	+				+0.2
5,215,674	+				+0.7
5,215,674	+				-1.2
5,215,675	-				+1.0
5,215,697	+				-1.3
5,215,704	+				+0.8
5,215,743	+				+1.1
5,215,816	-		Echvi_4359	0.11	-0.5
5,215,820	+		Echvi_4359	0.12	+0.5
5,215,982	+		Echvi_4359	0.27	-0.0
5,215,982	+		Echvi_4359	0.27	-0.5
5,215,982	+		Echvi_4359	0.27	-1.6
5,215,983	-		Echvi_4359	0.27	+0.0
5,215,983	-		Echvi_4359	0.27	+0.7
5,215,992	+		Echvi_4359	0.28	-0.2
5,215,992	+		Echvi_4359	0.28	-0.3
5,215,992	+		Echvi_4359	0.28	+0.8
5,216,088	-		Echvi_4359	0.37	+1.1
5,216,088	-		Echvi_4359	0.37	+0.2
5,216,103	+		Echvi_4359	0.39	-0.3
5,216,130	-		Echvi_4359	0.41	-0.1
5,216,264	+		Echvi_4359	0.54	+0.4
5,216,271	-		Echvi_4359	0.55	+0.5
5,216,309	+		Echvi_4359	0.59	-0.1
5,216,309	+		Echvi_4359	0.59	-0.1
5,216,309	+		Echvi_4359	0.59	+0.4
5,216,309	+		Echvi_4359	0.59	+1.0
5,216,310	-		Echvi_4359	0.59	-1.1
5,216,389	+		Echvi_4359	0.66	-0.3
5,216,389	+		Echvi_4359	0.66	+2.5
5,216,556	-		Echvi_4359	0.82	-0.2
5,216,674	+				-0.3
5,216,832	+		Echvi_4360	0.16	+0.2
5,216,833	-		Echvi_4360	0.16	+0.5
5,216,986	+		Echvi_4360	0.40	+0.3
5,217,057	+		Echvi_4360	0.52	+0.7
5,217,057	+		Echvi_4360	0.52	+0.0
5,217,057	+		Echvi_4360	0.52	-0.8
5,217,057	+		Echvi_4360	0.52	+1.7
5,217,071	-		Echvi_4360	0.54	-0.6
5,217,071	-		Echvi_4360	0.54	+0.7
5,217,092	+		Echvi_4360	0.58	-0.9
5,217,093	-		Echvi_4360	0.58	+0.9
5,217,221	-		Echvi_4360	0.78	-0.2
5,217,340	-				-0.3
5,217,341	+				+0.7
5,217,342	+				-0.1
5,217,353	+				+0.3
5,217,354	-				-0.1
5,217,449	-		Echvi_4361	0.13	+1.8
5,217,485	+		Echvi_4361	0.19	-1.8
5,217,495	+		Echvi_4361	0.21	-0.5
5,217,495	+		Echvi_4361	0.21	+0.1
5,217,496	-		Echvi_4361	0.21	-0.7
5,217,496	-		Echvi_4361	0.21	+0.7
5,217,611	+		Echvi_4361	0.38	-1.9