Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4195

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,007,975	-				+0.7
5,007,975	-				+0.2
5,007,975	-				-0.1
5,008,009	+				-1.8
5,008,078	+		Echvi_4193	0.12	-0.7
5,008,192	+		Echvi_4193	0.50	+0.0
5,008,192	+		Echvi_4193	0.50	+0.6
5,008,193	-		Echvi_4193	0.51	-0.1
5,008,193	-		Echvi_4193	0.51	-0.3
5,008,193	-		Echvi_4193	0.51	-1.6
5,008,193	-		Echvi_4193	0.51	-0.1
5,008,340	-				+1.3
5,008,340	-				+0.0
5,008,340	-				-0.6
5,008,340	-				+0.5
5,008,357	+				-1.2
5,008,357	+				+0.7
5,008,358	-				-0.9
5,008,504	+		Echvi_4194	0.49	-0.8
5,008,505	-		Echvi_4194	0.50	+0.4
5,008,508	-		Echvi_4194	0.51	+0.4
5,008,508	-		Echvi_4194	0.51	-0.4
5,008,509	+		Echvi_4194	0.51	-0.6
5,008,510	-		Echvi_4194	0.52	-0.5
5,008,510	-		Echvi_4194	0.52	+0.3
5,008,740	+				-0.7
5,008,812	-				+0.5
5,009,203	-		Echvi_4195	0.25	+0.9
5,009,203	-		Echvi_4195	0.25	+0.1
5,009,203	-		Echvi_4195	0.25	+0.5
5,009,231	+		Echvi_4195	0.27	-0.1
5,009,231	+		Echvi_4195	0.27	-0.5
5,009,231	+		Echvi_4195	0.27	+1.0
5,009,232	-		Echvi_4195	0.27	+0.3
5,009,232	-		Echvi_4195	0.27	+0.6
5,009,232	-		Echvi_4195	0.27	+0.0
5,009,261	+		Echvi_4195	0.29	+0.6
5,009,261	+		Echvi_4195	0.29	+0.1
5,009,261	+		Echvi_4195	0.29	-1.2
5,009,262	-		Echvi_4195	0.29	+0.4
5,009,265	+		Echvi_4195	0.29	-0.2
5,009,265	+		Echvi_4195	0.29	-1.3
5,009,265	+		Echvi_4195	0.29	-0.3
5,009,265	+		Echvi_4195	0.29	+0.7
5,009,266	-		Echvi_4195	0.29	-0.3
5,009,270	+		Echvi_4195	0.30	+1.3
5,009,271	-		Echvi_4195	0.30	+1.2
5,009,316	+		Echvi_4195	0.33	+0.8
5,009,316	+		Echvi_4195	0.33	-0.9
5,009,393	+		Echvi_4195	0.38	-0.4
5,009,393	+		Echvi_4195	0.38	-0.3
5,009,394	-		Echvi_4195	0.38	+0.6
5,009,513	+		Echvi_4195	0.45	-0.3
5,009,575	-		Echvi_4195	0.49	+0.8
5,009,618	+		Echvi_4195	0.52	+1.9
5,009,750	+		Echvi_4195	0.60	+0.8
5,010,045	-		Echvi_4195	0.79	+0.6
5,010,158	+		Echvi_4195	0.87	+2.5
5,010,159	-		Echvi_4195	0.87	-0.7
5,010,178	+		Echvi_4195	0.88	-1.2
5,010,206	+		Echvi_4195	0.90	+0.3
5,010,248	+				+1.3
5,010,263	+				-0.0
5,010,264	-				-0.0
5,010,302	-				+0.4
5,010,312	+				+2.4
5,010,313	-				+0.3
5,010,315	-				+0.6
5,010,349	-				+0.0
5,010,375	-				+0.5
5,010,380	+				-0.1
5,010,381	-				-0.3
5,010,385	+				-0.0
5,010,425	-				+0.1
5,010,469	-				-0.8
5,010,559	+				+0.7
5,010,559	+				+0.1
5,010,560	-				+0.4
5,010,560	-				+0.0
5,010,560	-				-0.5
5,010,564	-				-0.4
5,010,589	-				+1.2
5,010,591	+				+1.1
5,010,592	-				+1.7
5,010,664	+				+0.8
5,010,665	-				+0.1
5,010,784	-				-0.3
5,010,792	-				+2.7