Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4027

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
4,819,937	+		Echvi_4025	0.85	+1.1
4,820,023	-				-0.6
4,820,023	-				-2.2
4,820,023	-				-0.6
4,820,042	-				-3.2
4,820,065	+				+0.6
4,820,077	+				-0.6
4,820,080	+				+1.0
4,820,115	-				-0.8
4,820,171	+		Echvi_4026	0.15	+0.4
4,820,173	+		Echvi_4026	0.15	+2.1
4,820,173	+		Echvi_4026	0.15	-0.2
4,820,173	+		Echvi_4026	0.15	+0.2
4,820,257	+		Echvi_4026	0.26	+0.9
4,820,257	+		Echvi_4026	0.26	+0.9
4,820,257	+		Echvi_4026	0.26	+0.0
4,820,258	-		Echvi_4026	0.26	+0.2
4,820,258	-		Echvi_4026	0.26	-0.4
4,820,258	-		Echvi_4026	0.26	-0.3
4,820,304	-		Echvi_4026	0.31	-0.3
4,820,304	-		Echvi_4026	0.31	+1.9
4,820,304	-		Echvi_4026	0.31	+0.0
4,820,307	+		Echvi_4026	0.32	+0.2
4,820,308	-		Echvi_4026	0.32	-0.1
4,820,325	+		Echvi_4026	0.34	-0.8
4,820,326	-		Echvi_4026	0.34	+1.0
4,820,430	+		Echvi_4026	0.47	+0.4
4,820,430	+		Echvi_4026	0.47	+0.6
4,820,431	-		Echvi_4026	0.47	-1.5
4,820,431	-		Echvi_4026	0.47	+0.0
4,820,432	+		Echvi_4026	0.47	+0.1
4,820,432	+		Echvi_4026	0.47	-0.8
4,820,432	+		Echvi_4026	0.47	+0.4
4,820,432	+		Echvi_4026	0.47	+0.2
4,820,458	+		Echvi_4026	0.51	-0.5
4,820,469	+		Echvi_4026	0.52	+1.1
4,820,470	-		Echvi_4026	0.52	+1.6
4,820,471	+		Echvi_4026	0.52	+0.3
4,820,472	-		Echvi_4026	0.52	-0.2
4,820,504	-		Echvi_4026	0.56	-0.9
4,820,526	+		Echvi_4026	0.59	-1.5
4,820,553	+		Echvi_4026	0.63	+0.5
4,820,647	+		Echvi_4026	0.74	+0.6
4,820,729	-		Echvi_4026	0.85	+1.3
4,820,775	+				+0.4
4,820,775	+				+0.7
4,820,776	-				+0.6
4,820,826	+				-0.4
4,820,827	-				+0.1
4,820,827	-				-1.3
4,820,851	-				-0.4
4,820,873	-				-1.1
4,820,986	+				+0.1
4,820,986	+				+0.5
4,820,987	-				+1.2
4,821,028	+				-1.0
4,821,032	+				+1.4
4,821,032	+				-1.1
4,821,072	+		Echvi_4027	0.11	+0.2
4,821,085	+		Echvi_4027	0.11	-1.1
4,821,085	+		Echvi_4027	0.11	-0.4
4,821,086	-		Echvi_4027	0.12	-0.3
4,821,095	+		Echvi_4027	0.12	+0.3
4,821,188	-		Echvi_4027	0.19	+0.2
4,821,202	+		Echvi_4027	0.20	-0.6
4,821,203	-				+2.6
4,821,332	-		Echvi_4027	0.30	+0.6
4,821,335	+		Echvi_4027	0.30	-0.4
4,821,336	-		Echvi_4027	0.30	+0.9
4,821,336	-		Echvi_4027	0.30	+1.3
4,821,336	-		Echvi_4027	0.30	+1.4
4,821,336	-		Echvi_4027	0.30	+1.6
4,821,337	+		Echvi_4027	0.30	-0.1
4,821,337	+		Echvi_4027	0.30	-1.5
4,821,338	-		Echvi_4027	0.30	+2.6
4,821,346	+		Echvi_4027	0.31	-0.8
4,821,356	+		Echvi_4027	0.32	+1.6
4,821,357	-		Echvi_4027	0.32	+1.1
4,821,391	+		Echvi_4027	0.34	-1.1
4,821,392	-		Echvi_4027	0.34	+0.2
4,821,455	-		Echvi_4027	0.39	-0.1
4,821,455	-		Echvi_4027	0.39	-1.0
4,821,482	+		Echvi_4027	0.41	-0.8
4,821,496	-		Echvi_4027	0.42	+0.9
4,821,497	+		Echvi_4027	0.42	+0.2
4,821,523	+		Echvi_4027	0.44	-1.8
4,821,523	+		Echvi_4027	0.44	-0.9
4,821,549	-		Echvi_4027	0.46	-0.2
4,821,574	+		Echvi_4027	0.48	-1.0
4,821,574	+		Echvi_4027	0.48	+0.0
4,821,574	+		Echvi_4027	0.48	+0.1
4,821,575	-		Echvi_4027	0.48	+0.5
4,821,575	-		Echvi_4027	0.48	+0.7
4,821,575	-		Echvi_4027	0.48	+1.0
4,821,575	-		Echvi_4027	0.48	+0.0
4,821,592	+		Echvi_4027	0.49	-0.6
4,821,702	+		Echvi_4027	0.57	-0.2
4,821,703	-		Echvi_4027	0.58	-0.3
4,821,703	-		Echvi_4027	0.58	+0.5
4,821,703	-		Echvi_4027	0.58	-0.2
4,821,728	-		Echvi_4027	0.59	+0.0
4,821,728	-		Echvi_4027	0.59	+0.3
4,821,801	+		Echvi_4027	0.65	-0.3
4,821,888	+		Echvi_4027	0.71	-0.3
4,821,895	+		Echvi_4027	0.72	-0.1
4,821,957	-		Echvi_4027	0.77	+0.2
4,821,977	-		Echvi_4027	0.78	-1.6
4,822,095	-		Echvi_4027	0.87	+0.6
4,822,095	-		Echvi_4027	0.87	+0.1
4,822,095	-		Echvi_4027	0.87	-0.6
4,822,097	+		Echvi_4027	0.87	+0.5
4,822,098	-		Echvi_4027	0.87	+0.9
4,822,130	+		Echvi_4027	0.89	-1.8
4,822,130	+		Echvi_4027	0.89	-0.2
4,822,130	+		Echvi_4027	0.89	-0.2
4,822,168	-				+0.6
4,822,221	-				+0.2
4,822,231	+				+1.6
4,822,232	-				+0.6
4,822,232	-				+1.2
4,822,232	-				-0.2
4,822,232	-				+0.7
4,822,232	-				+0.4
4,822,275	+				+0.7
4,822,278	+				-0.3
4,822,310	+				+1.0
4,822,310	+				-1.6
4,822,311	-				+0.9
4,822,312	+				-0.4
4,822,313	-				+0.4
4,822,313	-				+2.4
4,822,313	-				+0.4
4,822,313	-				+0.3
4,822,317	-				+0.8
4,822,322	-				+0.9
4,822,361	+				+1.3
4,822,373	+				-0.4
4,822,379	+				-1.2
4,822,380	-				+1.4
4,822,473	-				-0.5
4,822,559	-				-1.1
4,822,560	+				+0.0
4,822,560	+				+2.6
4,822,563	+				+1.2
4,822,563	+				-0.2
4,822,585	+				+0.4
4,822,631	-				-1.5
4,822,631	-				-0.8
4,822,640	-				-0.7
4,822,688	-				-0.9
4,822,693	+				-0.3
4,822,694	-				+0.6
4,822,697	-				-0.9
4,822,697	-				-0.5
4,822,697	-				-0.2
4,822,697	-				+0.5
4,822,848	-		Echvi_4028	0.12	+0.4
4,822,948	+		Echvi_4028	0.16	-1.3
4,822,948	+		Echvi_4028	0.16	-0.5
4,823,003	+		Echvi_4028	0.18	+0.0
4,823,004	-		Echvi_4028	0.19	-1.2
4,823,008	-		Echvi_4028	0.19	-1.6
4,823,062	+		Echvi_4028	0.21	-0.3
4,823,062	+		Echvi_4028	0.21	-2.4
4,823,063	-		Echvi_4028	0.21	-1.5
4,823,063	-		Echvi_4028	0.21	-0.1
4,823,088	+		Echvi_4028	0.22	-0.3
4,823,088	+		Echvi_4028	0.22	-2.9
4,823,089	-		Echvi_4028	0.22	-1.1
4,823,123	+		Echvi_4028	0.24	+0.0
4,823,124	-		Echvi_4028	0.24	+1.6
4,823,132	+		Echvi_4028	0.24	+1.0
4,823,132	+		Echvi_4028	0.24	-0.4
4,823,242	+		Echvi_4028	0.29	+0.6