Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3927

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
4,701,703	+		Echvi_3925	0.65	+0.4
4,701,706	+		Echvi_3925	0.66	+0.4
4,701,706	+		Echvi_3925	0.66	-0.3
4,701,706	+		Echvi_3925	0.66	+1.8
4,701,706	+		Echvi_3925	0.66	-0.4
4,701,707	-		Echvi_3925	0.66	+2.3
4,701,709	-		Echvi_3925	0.66	-0.1
4,701,736	+		Echvi_3925	0.71	+0.3
4,701,737	-		Echvi_3925	0.71	-0.1
4,701,737	-		Echvi_3925	0.71	-0.1
4,701,782	-		Echvi_3925	0.78	+0.3
4,701,796	+		Echvi_3925	0.81	+0.0
4,701,808	+		Echvi_3925	0.83	-1.0
4,701,811	+		Echvi_3925	0.83	+2.6
4,701,811	+		Echvi_3925	0.83	-0.0
4,701,910	+				+0.6
4,701,910	+				+0.8
4,701,978	+				+0.5
4,701,978	+				+1.2
4,701,978	+				+0.0
4,701,979	-				+0.8
4,701,979	-				+0.3
4,701,979	-				+0.3
4,701,979	-				-0.8
4,702,029	-				-0.6
4,702,045	+				+0.5
4,702,121	+		Echvi_3926	0.20	-0.9
4,702,122	-		Echvi_3926	0.20	+2.1
4,702,238	+		Echvi_3926	0.43	-1.0
4,702,251	+		Echvi_3926	0.46	-1.6
4,702,252	-		Echvi_3926	0.46	-0.0
4,702,254	+		Echvi_3926	0.46	-0.4
4,702,255	-		Echvi_3926	0.46	-0.8
4,702,272	-		Echvi_3926	0.50	+0.7
4,702,359	+		Echvi_3926	0.67	+0.3
4,702,433	+		Echvi_3926	0.81	+0.7
4,702,434	-		Echvi_3926	0.81	+0.1
4,702,663	+				+1.1
4,702,663	+				+1.6
4,702,689	+				+0.3
4,702,690	-				+0.0
4,702,792	-		Echvi_3927	0.15	-0.9
4,702,896	+		Echvi_3927	0.31	-1.1
4,702,896	+		Echvi_3927	0.31	-0.6
4,702,898	+		Echvi_3927	0.32	+0.3
4,702,899	-		Echvi_3927	0.32	-0.2
4,702,899	-		Echvi_3927	0.32	-0.5
4,702,917	-		Echvi_3927	0.35	+0.1
4,702,919	-		Echvi_3927	0.35	-0.3
4,702,934	+		Echvi_3927	0.37	+0.2
4,702,935	-		Echvi_3927	0.38	-0.7
4,702,935	-		Echvi_3927	0.38	+0.1
4,702,949	+		Echvi_3927	0.40	+0.5
4,702,950	-		Echvi_3927	0.40	+0.0
4,702,950	-		Echvi_3927	0.40	-1.3
4,702,952	+		Echvi_3927	0.40	+0.1
4,703,122	-		Echvi_3927	0.67	+1.0
4,703,122	-		Echvi_3927	0.67	-0.1
4,703,125	+		Echvi_3927	0.67	-0.7
4,703,302	+				+0.4
4,703,321	-				+0.5
4,703,329	+				+1.5
4,703,329	+				+0.6
4,703,330	-				+0.9
4,703,330	-				+0.4
4,703,363	-				-1.0
4,703,403	+				+0.2
4,703,403	+				+0.5
4,703,403	+				+1.0
4,703,438	+				-0.8
4,703,439	-				-0.4
4,703,458	+				+0.6
4,703,458	+				+0.2
4,703,459	-				-1.0
4,703,461	+				-0.5
4,703,461	+				+0.2
4,703,461	+				-1.8
4,703,614	+				+0.2
4,703,615	-				-0.4
4,703,615	-				-0.1
4,703,627	+				-1.2
4,703,639	-				+0.0
4,703,762	-		Echvi_3928	0.18	-0.5
4,703,776	+		Echvi_3928	0.19	-0.1
4,703,972	+		Echvi_3928	0.45	-0.5
4,703,972	+		Echvi_3928	0.45	+0.3
4,704,042	+		Echvi_3928	0.55	+0.7
4,704,069	+		Echvi_3928	0.58	+0.1
4,704,069	+		Echvi_3928	0.58	+0.0
4,704,069	+		Echvi_3928	0.58	-0.2
4,704,069	+		Echvi_3928	0.58	-0.2
4,704,070	-		Echvi_3928	0.58	-0.8
4,704,070	-		Echvi_3928	0.58	-0.2
4,704,292	+		Echvi_3928	0.87	-0.4