Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3814

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
4,555,108	+		Echvi_3812	0.88	+0.6
4,555,109	-		Echvi_3812	0.88	+0.6
4,555,109	-		Echvi_3812	0.88	-1.2
4,555,112	-		Echvi_3812	0.88	-0.6
4,555,186	+				+1.4
4,555,196	+				-0.9
4,555,196	+				+0.3
4,555,197	-				+0.0
4,555,205	+				+3.2
4,555,209	+				-0.7
4,555,262	+				+0.5
4,555,286	+				+0.2
4,555,340	-				+0.0
4,555,350	+				+0.3
4,555,371	+				+0.0
4,555,381	-				-0.3
4,555,386	-				+0.2
4,555,391	+				+2.0
4,555,392	-				+1.0
4,555,458	+				+0.1
4,555,458	+				+0.2
4,555,459	-				-0.3
4,555,459	-				-1.1
4,555,472	-				+1.0
4,555,566	+				+0.2
4,555,596	-				+0.3
4,555,596	-				-1.0
4,555,649	+		Echvi_3813	0.17	+0.5
4,555,649	+		Echvi_3813	0.17	-0.2
4,555,669	+		Echvi_3813	0.21	+0.7
4,555,670	-		Echvi_3813	0.21	+0.4
4,555,714	+		Echvi_3813	0.30	+2.2
4,555,760	-		Echvi_3813	0.40	-0.5
4,555,968	-		Echvi_3813	0.82	-0.1
4,556,024	+				+0.2
4,556,024	+				+0.5
4,556,080	+				-0.3
4,556,080	+				-0.4
4,556,081	-				+0.6
4,556,275	+		Echvi_3814	0.42	+0.5
4,556,275	+		Echvi_3814	0.42	+0.4
4,556,276	-		Echvi_3814	0.42	+1.2
4,556,276	-		Echvi_3814	0.42	+0.9
4,556,308	+		Echvi_3814	0.50	-0.5
4,556,309	-		Echvi_3814	0.50	+1.4
4,556,337	-		Echvi_3814	0.56	-0.1
4,556,364	-		Echvi_3814	0.63	+0.2
4,556,442	-		Echvi_3814	0.81	+1.5
4,556,442	-		Echvi_3814	0.81	-1.8
4,556,498	+				-0.7
4,556,502	+				-1.8
4,556,502	+				+0.9
4,556,502	+				-0.4
4,556,503	-				-0.3
4,556,522	+				+0.1
4,556,523	-				+0.3
4,556,576	+				+0.6
4,556,576	+				+0.5
4,556,576	+				-0.3
4,556,576	+				-0.4
4,556,577	-				+0.1
4,556,577	-				-0.8
4,556,581	+				+1.6
4,556,582	-				+0.3
4,556,585	+				-0.1
4,556,585	+				+1.3
4,556,585	+				+0.6
4,556,586	-				+1.1
4,556,586	-				-0.9
4,556,605	+				-0.7
4,556,605	+				-0.3
4,556,607	+				-1.1
4,556,608	-				+2.0
4,556,660	+				+0.1
4,556,667	-				+0.1
4,556,669	+				+0.9
4,556,669	+				-1.3
4,556,780	-				+0.9
4,556,797	-				-0.7
4,556,820	+				-0.2
4,556,827	-				+1.4
4,556,904	-				-0.1
4,556,904	-				+0.1
4,556,965	-				-0.7
4,557,002	+				+2.2
4,557,003	-				+0.1
4,557,064	+				+0.8
4,557,143	+		Echvi_3815	0.16	-0.7
4,557,174	+		Echvi_3815	0.19	+0.3
4,557,175	-		Echvi_3815	0.19	-0.4
4,557,236	-		Echvi_3815	0.25	+0.2
4,557,236	-		Echvi_3815	0.25	-0.4
4,557,236	-		Echvi_3815	0.25	+0.5
4,557,262	-		Echvi_3815	0.27	-0.4
4,557,262	-		Echvi_3815	0.27	-0.8
4,557,333	-		Echvi_3815	0.34	+0.1
4,557,353	+		Echvi_3815	0.35	+0.0
4,557,353	+		Echvi_3815	0.35	-0.5
4,557,353	+		Echvi_3815	0.35	+0.3
4,557,354	-		Echvi_3815	0.36	+1.3
4,557,354	-		Echvi_3815	0.36	+0.3
4,557,358	+		Echvi_3815	0.36	-0.5
4,557,359	-		Echvi_3815	0.36	-1.0
4,557,398	-		Echvi_3815	0.40	+0.0
4,557,439	-		Echvi_3815	0.43	-0.7