Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3486

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
4,125,053	+		Echvi_3484	0.75	+0.8
4,125,084	-		Echvi_3484	0.80	+0.2
4,125,085	+		Echvi_3484	0.80	+0.0
4,125,116	+		Echvi_3484	0.86	+0.6
4,125,116	+		Echvi_3484	0.86	-1.4
4,125,117	-		Echvi_3484	0.86	-1.0
4,125,154	+				+0.5
4,125,155	-				-0.4
4,125,155	-				-0.6
4,125,155	-				-0.1
4,125,156	+				-0.1
4,125,157	-				-0.4
4,125,157	-				-0.4
4,125,179	-				+0.2
4,125,199	-				-0.3
4,125,347	+				+0.4
4,125,347	+				-0.4
4,125,348	-				-0.4
4,125,348	-				-0.1
4,125,354	-				+0.2
4,125,464	+		Echvi_3485	0.15	-1.2
4,125,577	+		Echvi_3485	0.35	-1.0
4,125,577	+		Echvi_3485	0.35	-1.3
4,125,578	-		Echvi_3485	0.35	+0.4
4,125,578	-		Echvi_3485	0.35	-0.3
4,125,739	+		Echvi_3485	0.64	-0.3
4,125,740	-		Echvi_3485	0.64	+0.2
4,125,772	-		Echvi_3485	0.69	-0.0
4,125,850	-		Echvi_3485	0.83	+1.2
4,125,878	+		Echvi_3485	0.88	+0.0
4,125,916	+				+0.6
4,126,062	+				+0.7
4,126,062	+				+1.7
4,126,062	+				+2.3
4,126,067	-				+0.1
4,126,067	-				-2.1
4,126,067	-				+1.6
4,126,071	+				+1.3
4,126,071	+				+1.6
4,126,071	+				+2.0
4,126,072	-				-0.9
4,126,074	+				+1.0
4,126,074	+				+2.5
4,126,074	+				+1.6
4,126,112	+				+1.8
4,126,112	+				+2.8
4,126,174	-		Echvi_3486	0.11	+0.3
4,126,174	-		Echvi_3486	0.11	+1.6
4,126,174	-		Echvi_3486	0.11	-0.5
4,126,176	+		Echvi_3486	0.11	+1.8
4,126,176	+		Echvi_3486	0.11	+1.6
4,126,176	+		Echvi_3486	0.11	+0.7
4,126,177	-		Echvi_3486	0.11	-1.2
4,126,177	-		Echvi_3486	0.11	-0.7
4,126,232	+		Echvi_3486	0.15	+2.9
4,126,296	-		Echvi_3486	0.21	+1.6
4,126,323	+		Echvi_3486	0.23	+1.8
4,126,323	+		Echvi_3486	0.23	+0.6
4,126,324	-		Echvi_3486	0.23	+1.0
4,126,324	-		Echvi_3486	0.23	-0.3
4,126,343	-		Echvi_3486	0.25	+1.0
4,126,413	-		Echvi_3486	0.31	-0.9
4,126,565	-		Echvi_3486	0.43	-1.6
4,126,641	+		Echvi_3486	0.50	+3.0
4,126,642	-		Echvi_3486	0.50	+0.5
4,126,652	-		Echvi_3486	0.51	-0.4
4,126,716	-		Echvi_3486	0.56	-0.2
4,126,716	-		Echvi_3486	0.56	+0.8
4,126,773	-		Echvi_3486	0.61	-1.8
4,126,795	+		Echvi_3486	0.63	+1.8
4,126,817	-		Echvi_3486	0.64	-0.1
4,126,838	+		Echvi_3486	0.66	+1.3
4,126,839	-		Echvi_3486	0.66	+0.0
4,126,842	-		Echvi_3486	0.67	-0.4
4,126,851	+		Echvi_3486	0.67	+1.7
4,126,852	-		Echvi_3486	0.67	-0.6
4,126,852	-		Echvi_3486	0.67	-0.7
4,126,852	-		Echvi_3486	0.67	+0.6
4,126,904	-		Echvi_3486	0.72	+1.7
4,126,908	+		Echvi_3486	0.72	+1.9
4,126,908	+		Echvi_3486	0.72	+2.4
4,126,908	+		Echvi_3486	0.72	+1.8
4,126,908	+		Echvi_3486	0.72	+2.2
4,126,908	+		Echvi_3486	0.72	+1.7
4,126,909	-		Echvi_3486	0.72	-0.4
4,126,909	-		Echvi_3486	0.72	-1.1
4,126,909	-		Echvi_3486	0.72	-1.6
4,126,909	-		Echvi_3486	0.72	-0.4
4,126,909	-				+3.2
4,126,909	-		Echvi_3486	0.72	-0.1
4,126,910	+		Echvi_3486	0.72	-1.7
4,126,910	+		Echvi_3486	0.72	+1.4
4,126,910	+		Echvi_3486	0.72	+0.9
4,126,911	-		Echvi_3486	0.72	+1.6
4,126,911	-		Echvi_3486	0.72	+1.4
4,126,911	-		Echvi_3486	0.72	-1.6
4,126,911	-		Echvi_3486	0.72	+0.6
4,126,911	-		Echvi_3486	0.72	-1.5
4,126,911	-		Echvi_3486	0.72	-0.5
4,126,912	+		Echvi_3486	0.72	+1.5
4,126,913	-		Echvi_3486	0.73	-0.8
4,126,913	-		Echvi_3486	0.73	+0.3
4,126,929	-		Echvi_3486	0.74	+0.0
4,126,986	-		Echvi_3486	0.79	-0.2
4,127,048	+		Echvi_3486	0.84	+1.6
4,127,054	-		Echvi_3486	0.84	-1.5
4,127,149	+				+2.1
4,127,218	-				+0.6
4,127,221	+				+0.8
4,127,291	-				-1.1
4,127,324	-				+0.3
4,127,336	+				-1.6
4,127,354	-				-0.5
4,127,420	-				+0.8
4,127,420	-				+1.0
4,127,440	+				+2.2
4,127,524	+				+0.8
4,127,542	-				+0.1
4,127,542	-				+0.4
4,127,593	+				-0.6
4,127,599	+				+0.1
4,127,600	-				-1.2
4,127,601	-				+0.3
4,127,658	+				-0.4
4,127,659	-				-1.0
4,127,676	+		Echvi_3487	0.10	-0.3
4,127,676	+		Echvi_3487	0.10	+0.6
4,127,676	+		Echvi_3487	0.10	+0.2
4,127,676	+		Echvi_3487	0.10	+0.1
4,127,677	-		Echvi_3487	0.10	-0.0
4,127,677	-		Echvi_3487	0.10	+1.8
4,127,677	-		Echvi_3487	0.10	-0.1
4,127,677	-		Echvi_3487	0.10	+0.3
4,127,677	-		Echvi_3487	0.10	+0.1
4,127,677	-		Echvi_3487	0.10	-0.1
4,127,677	-		Echvi_3487	0.10	-0.1
4,127,683	+		Echvi_3487	0.10	-1.1
4,127,683	+		Echvi_3487	0.10	-0.7
4,127,684	-		Echvi_3487	0.10	-1.4
4,127,684	-		Echvi_3487	0.10	+2.9
4,127,714	+		Echvi_3487	0.11	+0.4
4,127,714	+		Echvi_3487	0.11	+0.4
4,127,714	+		Echvi_3487	0.11	-0.2
4,127,714	+		Echvi_3487	0.11	-2.1
4,127,715	-		Echvi_3487	0.11	+0.2
4,127,718	-		Echvi_3487	0.11	-1.8
4,127,772	-		Echvi_3487	0.13	-0.1
4,127,776	+		Echvi_3487	0.13	+0.0
4,127,776	+		Echvi_3487	0.13	+0.8
4,127,777	-		Echvi_3487	0.13	-0.0
4,127,777	-		Echvi_3487	0.13	+0.4
4,128,094	+		Echvi_3487	0.23	-1.1
4,128,128	+		Echvi_3487	0.24	+0.6
4,128,129	-		Echvi_3487	0.24	+1.2
4,128,139	+		Echvi_3487	0.24	-2.1
4,128,144	-		Echvi_3487	0.24	-0.1
4,128,154	+		Echvi_3487	0.24	-1.0
4,128,155	-		Echvi_3487	0.24	+0.1
4,128,165	-		Echvi_3487	0.25	-2.4
4,128,186	+		Echvi_3487	0.25	-0.3
4,128,187	-		Echvi_3487	0.25	-0.3
4,128,187	-		Echvi_3487	0.25	-1.4
4,128,194	-		Echvi_3487	0.26	-0.4
4,128,229	+		Echvi_3487	0.27	+0.0
4,128,229	+		Echvi_3487	0.27	+0.6
4,128,229	+		Echvi_3487	0.27	+0.3
4,128,230	-		Echvi_3487	0.27	+0.2