Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2229

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
2,652,506	+				+0.2
2,652,528	+				+1.4
2,652,529	-				-0.6
2,652,541	-				-0.3
2,652,545	-				-0.6
2,652,586	-				+0.1
2,652,633	+				-0.2
2,652,634	-				+0.6
2,652,650	+				+0.6
2,652,650	+				-0.2
2,652,685	-				-1.9
2,652,750	-				-0.5
2,652,750	-				+0.1
2,652,757	-				+0.3
2,652,803	+		Echvi_2228	0.16	-0.7
2,652,804	-		Echvi_2228	0.16	+0.2
2,652,864	-		Echvi_2228	0.25	-0.7
2,652,894	+		Echvi_2228	0.29	+1.0
2,652,895	-		Echvi_2228	0.29	-1.1
2,652,895	-		Echvi_2228	0.29	-0.1
2,652,940	+		Echvi_2228	0.36	+0.7
2,652,941	-		Echvi_2228	0.36	-0.7
2,652,953	-		Echvi_2228	0.38	-0.9
2,652,954	+		Echvi_2228	0.38	+1.1
2,652,954	+		Echvi_2228	0.38	-0.7
2,652,954	+		Echvi_2228	0.38	-0.2
2,652,955	-		Echvi_2228	0.38	-0.4
2,652,955	-		Echvi_2228	0.38	-0.9
2,653,094	-		Echvi_2228	0.59	+0.4
2,653,124	+		Echvi_2228	0.64	-0.2
2,653,124	+		Echvi_2228	0.64	+1.2
2,653,125	-		Echvi_2228	0.64	-0.5
2,653,125	-		Echvi_2228	0.64	-0.7
2,653,125	-		Echvi_2228	0.64	+1.2
2,653,130	+		Echvi_2228	0.65	+0.2
2,653,131	-		Echvi_2228	0.65	-0.3
2,653,131	-		Echvi_2228	0.65	+0.3
2,653,155	+		Echvi_2228	0.69	+0.8
2,653,156	-		Echvi_2228	0.69	+0.4
2,653,197	+		Echvi_2228	0.75	+0.6
2,653,300	+				-0.9
2,653,301	-				+0.1
2,653,321	-				+0.2
2,653,331	-				+0.4
2,653,345	-				+1.6
2,653,396	-				-0.6
2,653,396	-				+0.1
2,653,485	+				-0.9
2,653,486	-				+1.0
2,653,602	+		Echvi_2229	0.17	-0.2
2,653,602	+		Echvi_2229	0.17	-0.9
2,653,602	+		Echvi_2229	0.17	-0.1
2,653,603	-		Echvi_2229	0.17	+0.8
2,653,659	-		Echvi_2229	0.24	+0.6
2,653,659	-		Echvi_2229	0.24	-0.4
2,653,693	+		Echvi_2229	0.29	+0.1
2,653,761	+		Echvi_2229	0.38	-0.2
2,653,762	-		Echvi_2229	0.38	-0.8
2,653,762	-		Echvi_2229	0.38	-1.4
2,653,795	+		Echvi_2229	0.42	-0.2
2,653,840	-		Echvi_2229	0.48	+0.1
2,653,842	-		Echvi_2229	0.49	-2.5
2,653,881	-		Echvi_2229	0.54	+0.6
2,653,881	-		Echvi_2229	0.54	+1.4
2,653,974	+		Echvi_2229	0.66	+0.6
2,653,975	-		Echvi_2229	0.66	+0.6
2,654,015	+		Echvi_2229	0.72	+1.0
2,654,051	+		Echvi_2229	0.77	+1.1
2,654,052	-		Echvi_2229	0.77	+0.8
2,654,072	+		Echvi_2229	0.79	-1.2
2,654,073	-		Echvi_2229	0.79	+1.8
2,654,232	+				+0.2
2,654,233	-				+0.4
2,654,233	-				+0.2
2,654,233	-				-0.8
2,654,233	-				-2.2
2,654,236	+				+0.6
2,654,236	+				+0.6
2,654,286	+				+1.0
2,654,331	+				+2.4
2,654,331	+				+1.1
2,654,332	-				-0.1
2,654,352	+				+1.4
2,654,353	-				+0.7
2,654,378	+				+0.5
2,654,384	+				+0.9
2,654,384	+				+1.2
2,654,536	+		Echvi_2230	0.14	-0.9
2,654,536	+		Echvi_2230	0.14	+0.1
2,654,537	-		Echvi_2230	0.14	+0.1
2,654,538	+		Echvi_2230	0.14	+0.6
2,654,614	+		Echvi_2230	0.21	+2.1
2,654,614	+		Echvi_2230	0.21	-0.4
2,654,625	-		Echvi_2230	0.22	+0.6
2,654,657	-		Echvi_2230	0.25	+0.0
2,654,717	-		Echvi_2230	0.31	-0.2
2,654,717	-		Echvi_2230	0.31	-0.4
2,654,839	+		Echvi_2230	0.42	-1.2
2,655,026	-		Echvi_2230	0.60	+0.1
2,655,053	-		Echvi_2230	0.63	-0.5
2,655,053	-		Echvi_2230	0.63	-0.2
2,655,187	-		Echvi_2230	0.75	-0.7