Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1882

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
2,209,162	-				+0.2
2,209,182	-				+1.0
2,209,205	+				-2.2
2,209,351	+		Echvi_1881	0.12	+2.6
2,209,409	+		Echvi_1881	0.20	+0.9
2,209,479	+		Echvi_1881	0.30	+2.2
2,209,738	+		Echvi_1881	0.66	-0.7
2,209,763	-		Echvi_1881	0.69	+1.1
2,209,765	-		Echvi_1881	0.70	-0.0
2,209,765	-		Echvi_1881	0.70	-1.9
2,209,933	+				-0.0
2,209,987	-				-0.9
2,209,993	-				+0.7
2,209,993	-				+0.3
2,209,993	-				-0.4
2,209,993	-				-0.4
2,209,993	-				-0.0
2,209,996	-				+0.4
2,209,999	-				+1.0
2,209,999	-				+0.9
2,210,005	-				+0.5
2,210,075	-				+1.6
2,210,106	-				+1.2
2,210,156	+		Echvi_1882	0.11	-0.9
2,210,360	+		Echvi_1882	0.57	-0.2
2,210,360	+		Echvi_1882	0.57	+0.0
2,210,361	-		Echvi_1882	0.58	+1.2
2,210,382	+		Echvi_1882	0.62	+0.6
2,210,383	-		Echvi_1882	0.63	+2.3
2,210,383	-		Echvi_1882	0.63	+1.1
2,210,383	-		Echvi_1882	0.63	+1.2
2,210,424	-		Echvi_1882	0.72	+0.8
2,210,457	-		Echvi_1882	0.79	+1.8
2,210,457	-		Echvi_1882	0.79	-0.2
2,210,489	+		Echvi_1882	0.87	-0.0
2,210,489	+		Echvi_1882	0.87	-0.2
2,210,489	+		Echvi_1882	0.87	-1.0
2,210,493	+		Echvi_1882	0.88	+1.6
2,210,493	+		Echvi_1882	0.88	-0.9
2,210,494	-		Echvi_1882	0.88	+0.7
2,210,499	+		Echvi_1882	0.89	+0.1
2,210,500	-		Echvi_1882	0.89	+0.6
2,210,714	+				-2.5
2,210,714	+				-0.5
2,210,714	+				-0.6
2,210,715	-				+0.3
2,210,736	+				-0.1
2,210,758	+				-0.9
2,210,765	-				-1.4
2,210,769	+				+1.6
2,210,769	+				+0.1
2,210,769	+				-1.2
2,210,770	-				-0.5
2,210,774	+				-1.5
2,210,774	+				+1.6
2,210,775	-				-0.7
2,210,775	-				-1.5
2,210,877	+		Echvi_1883	0.16	-1.7
2,210,878	-		Echvi_1883	0.16	-0.1
2,210,879	+		Echvi_1883	0.16	-0.9
2,210,879	+		Echvi_1883	0.16	-1.5
2,210,879	+		Echvi_1883	0.16	-0.9
2,210,879	+		Echvi_1883	0.16	-1.2
2,210,883	-		Echvi_1883	0.16	-1.6
2,210,916	+		Echvi_1883	0.18	+0.6
2,210,916	+		Echvi_1883	0.18	-2.0
2,210,981	+		Echvi_1883	0.22	-0.6
2,210,981	+		Echvi_1883	0.22	-0.9
2,210,982	-		Echvi_1883	0.22	-0.2
2,210,982	-		Echvi_1883	0.22	-0.7
2,210,982	-		Echvi_1883	0.22	+0.6
2,211,072	-		Echvi_1883	0.27	-0.5
2,211,148	-		Echvi_1883	0.32	+0.3
2,211,152	+		Echvi_1883	0.32	-0.2
2,211,152	+		Echvi_1883	0.32	-1.9
2,211,206	+		Echvi_1883	0.35	-0.7
2,211,207	-		Echvi_1883	0.35	-0.3
2,211,253	+		Echvi_1883	0.38	-1.6
2,211,253	+		Echvi_1883	0.38	-3.4
2,211,254	-		Echvi_1883	0.38	-0.6
2,211,373	+		Echvi_1883	0.45	+0.0
2,211,374	-		Echvi_1883	0.45	+1.6
2,211,431	+		Echvi_1883	0.49	-0.7
2,211,432	-		Echvi_1883	0.49	-1.2
2,211,458	-		Echvi_1883	0.50	+1.6
2,211,515	+		Echvi_1883	0.54	+0.1