Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1548

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
1,775,286	+				+0.1
1,775,286	+				+0.1
1,775,286	+				+0.1
1,775,296	+				+0.2
1,775,315	+				-0.3
1,775,320	+				-0.3
1,775,402	+		Echvi_1547	0.38	+0.4
1,775,402	+		Echvi_1547	0.38	+1.3
1,775,403	-		Echvi_1547	0.39	-0.4
1,775,415	-		Echvi_1547	0.46	-1.4
1,775,429	+		Echvi_1547	0.54	+1.0
1,775,429	+		Echvi_1547	0.54	+0.2
1,775,492	+		Echvi_1547	0.89	+0.3
1,775,492	+		Echvi_1547	0.89	-0.0
1,775,493	-				-0.4
1,775,493	-				-2.1
1,775,493	-				-0.6
1,775,493	-				+0.7
1,775,522	-				-1.7
1,775,530	+				+0.7
1,775,594	-				-0.1
1,775,605	+				+0.3
1,775,605	+				+0.4
1,775,606	-				-0.9
1,775,606	-				+0.4
1,775,620	+				+0.2
1,775,620	+				-0.1
1,775,621	-				-2.0
1,775,624	+				+0.4
1,775,624	+				+0.1
1,775,624	+				-1.9
1,775,624	+				-0.1
1,775,624	+				+0.6
1,775,625	-				+0.1
1,775,625	-				-0.6
1,775,625	-				-0.4
1,775,703	+				+1.1
1,775,703	+				-0.6
1,775,770	+				+0.7
1,775,770	+				+1.5
1,775,771	-				-1.1
1,775,775	-				+0.0
1,775,817	+				-0.9
1,775,967	+				-0.9
1,775,971	+				+0.1
1,776,021	+				-0.9
1,776,022	-				+1.1
1,776,022	-				-1.4
1,776,025	+				-1.1
1,776,085	-				+0.5
1,776,097	-				+0.3
1,776,184	-				+0.6
1,776,211	-				-0.2
1,776,218	+				-0.0
1,776,241	-				+1.3
1,776,309	-		Echvi_1548	0.21	-0.0
1,776,309	-		Echvi_1548	0.21	-3.0
1,776,309	-		Echvi_1548	0.21	-1.2
1,776,309	-		Echvi_1548	0.21	-1.1
1,776,359	-		Echvi_1548	0.32	-1.7
1,776,363	-		Echvi_1548	0.33	-0.3
1,776,417	+		Echvi_1548	0.44	+0.5
1,776,423	-		Echvi_1548	0.46	-1.6
1,776,427	+		Echvi_1548	0.46	-1.0
1,776,428	-		Echvi_1548	0.47	-0.5
1,776,428	-		Echvi_1548	0.47	-0.1
1,776,428	-		Echvi_1548	0.47	+0.9
1,776,428	-		Echvi_1548	0.47	-0.4
1,776,428	-		Echvi_1548	0.47	+0.3
1,776,428	-		Echvi_1548	0.47	-1.4
1,776,428	-		Echvi_1548	0.47	-1.1
1,776,429	+		Echvi_1548	0.47	-0.1
1,776,505	-		Echvi_1548	0.63	-1.6
1,776,505	-		Echvi_1548	0.63	-1.3
1,776,861	-				+1.1
1,776,871	+				-0.9
1,776,871	+				-0.1
1,776,872	-				+0.3
1,776,878	+				-1.1
1,776,879	-				+0.9
1,776,973	-		Echvi_1549	0.15	-0.7
1,776,973	-		Echvi_1549	0.15	+0.7
1,776,981	+		Echvi_1549	0.15	-1.2
1,777,003	-		Echvi_1549	0.17	+1.2
1,777,055	+		Echvi_1549	0.21	-0.6
1,777,056	-		Echvi_1549	0.21	+1.1
1,777,059	-		Echvi_1549	0.21	-0.6
1,777,089	-		Echvi_1549	0.23	-0.3
1,777,208	+		Echvi_1549	0.32	-2.2
1,777,211	+		Echvi_1549	0.32	-0.9
1,777,212	-		Echvi_1549	0.32	-0.3
1,777,212	-		Echvi_1549	0.32	-1.8
1,777,215	+		Echvi_1549	0.33	+0.7
1,777,216	-		Echvi_1549	0.33	+0.7
1,777,216	-		Echvi_1549	0.33	+0.8
1,777,216	-		Echvi_1549	0.33	-0.3
1,777,216	-				+0.1
1,777,237	-		Echvi_1549	0.34	-0.4
1,777,237	-		Echvi_1549	0.34	-0.9
1,777,351	+		Echvi_1549	0.43	+0.0
1,777,356	+		Echvi_1549	0.43	+0.7
1,777,356	+		Echvi_1549	0.43	-0.6
1,777,359	-		Echvi_1549	0.43	-0.2
1,777,373	-		Echvi_1549	0.44	+0.9
1,777,431	-		Echvi_1549	0.49	-1.0
1,777,465	+		Echvi_1549	0.51	+0.6
1,777,466	-		Echvi_1549	0.51	+1.2
1,777,610	+		Echvi_1549	0.62	-2.3
1,777,627	-		Echvi_1549	0.63	-0.2
1,777,629	+		Echvi_1549	0.64	-1.0
1,777,629	+		Echvi_1549	0.64	+0.0
1,777,630	-		Echvi_1549	0.64	+0.0
1,777,658	-		Echvi_1549	0.66	-0.7
1,777,658	-		Echvi_1549	0.66	+0.6
1,777,658	-		Echvi_1549	0.66	-1.7
1,777,662	+		Echvi_1549	0.66	-1.8
1,777,662	+		Echvi_1549	0.66	-1.3
1,777,662	+		Echvi_1549	0.66	-1.8
1,777,663	-		Echvi_1549	0.66	-0.8
1,777,663	-		Echvi_1549	0.66	+0.7
1,777,663	-		Echvi_1549	0.66	-0.0