Experiment: m.b. Carbenicillin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0806 and Echvi_0807 are separated by 891 nucleotides Echvi_0807 and Echvi_0808 are separated by 348 nucleotides
Echvi_0806: Echvi_0806 - seryl-tRNA synthetase, at 918,035 to 919,315
_0806
Echvi_0807: Echvi_0807 - transcription termination factor Rho, at 920,207 to 921,988
_0807
Echvi_0808: Echvi_0808 - hypothetical protein, at 922,337 to 924,913
_0808
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 919.349 kb on - strand at 919.425 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.506 kb on - strand at 919.506 kb on - strand at 919.524 kb on + strand at 919.525 kb on - strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.644 kb on - strand at 919.733 kb on + strand at 919.770 kb on - strand at 919.792 kb on + strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.801 kb on + strand at 919.848 kb on - strand at 919.870 kb on - strand at 919.893 kb on - strand at 919.893 kb on - strand at 919.922 kb on - strand at 919.946 kb on + strand at 919.947 kb on - strand at 919.982 kb on + strand at 919.983 kb on - strand at 919.984 kb on + strand at 920.007 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.139 kb on - strand at 922.004 kb on + strand at 922.047 kb on + strand at 922.142 kb on + strand at 922.142 kb on + strand at 922.173 kb on + strand at 922.173 kb on + strand at 922.173 kb on + strand at 922.176 kb on + strand at 922.177 kb on - strand at 922.185 kb on + strand at 922.186 kb on - strand at 922.188 kb on + strand at 922.188 kb on + strand at 922.189 kb on - strand at 922.189 kb on - strand at 922.189 kb on - strand at 922.262 kb on + strand at 922.262 kb on + strand at 922.263 kb on - strand at 922.308 kb on - strand at 922.308 kb on - strand at 922.308 kb on - strand at 922.311 kb on + strand at 922.311 kb on + strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.312 kb on - strand at 922.323 kb on + strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.324 kb on - strand at 922.329 kb on + strand at 922.330 kb on - strand at 922.330 kb on - strand at 922.386 kb on + strand at 922.507 kb on + strand at 922.508 kb on - strand at 922.508 kb on - strand at 922.508 kb on - strand at 922.536 kb on - strand at 922.565 kb on + strand at 922.566 kb on - strand at 922.566 kb on - strand at 922.586 kb on + strand at 922.587 kb on - strand at 922.592 kb on + strand at 922.593 kb on - strand at 922.593 kb on - strand at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.639 kb on - strand, within Echvi_0808 at 922.658 kb on + strand, within Echvi_0808 at 922.659 kb on - strand, within Echvi_0808 at 922.659 kb on - strand, within Echvi_0808 at 922.660 kb on + strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.661 kb on - strand, within Echvi_0808 at 922.664 kb on + strand, within Echvi_0808 at 922.665 kb on - strand, within Echvi_0808 at 922.665 kb on - strand, within Echvi_0808 at 922.668 kb on - strand, within Echvi_0808 at 922.669 kb on + strand, within Echvi_0808 at 922.670 kb on - strand, within Echvi_0808 at 922.673 kb on + strand, within Echvi_0808 at 922.687 kb on + strand, within Echvi_0808 at 922.693 kb on - strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.703 kb on + strand, within Echvi_0808 at 922.712 kb on - strand, within Echvi_0808 at 922.735 kb on + strand, within Echvi_0808 at 922.766 kb on + strand, within Echvi_0808 at 922.767 kb on - strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.769 kb on + strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.770 kb on - strand, within Echvi_0808 at 922.795 kb on - strand, within Echvi_0808 at 922.797 kb on + strand, within Echvi_0808 at 922.797 kb on + strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.798 kb on - strand, within Echvi_0808 at 922.845 kb on + strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.846 kb on - strand, within Echvi_0808 at 922.848 kb on + strand, within Echvi_0808 at 922.849 kb on - strand, within Echvi_0808 at 922.871 kb on + strand, within Echvi_0808 at 922.872 kb on - strand, within Echvi_0808 at 922.885 kb on + strand, within Echvi_0808 at 922.888 kb on + strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808 at 922.889 kb on - strand, within Echvi_0808
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.1 mg/ml remove 919,349 - -1.3 919,425 + +0.2 919,505 + -1.4 919,505 + -0.3 919,505 + -1.0 919,506 - -0.8 919,506 - +0.3 919,524 + -2.7 919,525 - +0.5 919,592 + +0.2 919,592 + -1.8 919,592 + -0.6 919,592 + -1.2 919,592 + +0.1 919,592 + +1.1 919,593 - +4.1 919,593 - +0.3 919,593 - -1.1 919,596 + -0.5 919,596 + -1.0 919,596 + -0.2 919,597 - -0.1 919,597 - +0.5 919,597 - -0.1 919,597 - +0.0 919,644 - -0.1 919,733 + -0.5 919,770 - -0.7 919,792 + +1.0 919,793 - -1.3 919,793 - -0.3 919,793 - +0.8 919,793 - -0.9 919,801 + -0.8 919,848 - -0.9 919,870 - +0.3 919,893 - -1.2 919,893 - -0.8 919,922 - -0.5 919,946 + +0.8 919,947 - -0.3 919,982 + +2.8 919,983 - +0.1 919,984 + +1.8 920,007 - -0.4 920,022 - -1.2 920,022 - -0.1 920,022 - +1.5 920,139 - +1.2 922,004 + +0.3 922,047 + -0.5 922,142 + -1.4 922,142 + +0.2 922,173 + +1.2 922,173 + +1.3 922,173 + +0.3 922,176 + +0.1 922,177 - +0.6 922,185 + -0.9 922,186 - +1.2 922,188 + -0.0 922,188 + -1.0 922,189 - +0.4 922,189 - +0.4 922,189 - -1.0 922,262 + +2.8 922,262 + -1.2 922,263 - -0.2 922,308 - +0.4 922,308 - +1.3 922,308 - -0.4 922,311 + +0.1 922,311 + -1.2 922,312 - -0.8 922,312 - +0.6 922,312 - +1.3 922,312 - -0.1 922,323 + -0.0 922,324 - +0.7 922,324 - -1.0 922,324 - +1.4 922,324 - +2.4 922,324 - +0.0 922,324 - +1.3 922,329 + +1.5 922,330 - +3.4 922,330 - +0.3 922,386 + -0.9 922,507 + -0.8 922,508 - +0.1 922,508 - -1.4 922,508 - -0.1 922,536 - +0.4 922,565 + -0.1 922,566 - -0.5 922,566 - +2.8 922,586 + +0.0 922,587 - -0.2 922,592 + -0.4 922,593 - +0.1 922,593 - -0.4 922,639 - Echvi_0808 0.12 -0.5 922,639 - Echvi_0808 0.12 +1.2 922,639 - Echvi_0808 0.12 +0.8 922,639 - Echvi_0808 0.12 -0.7 922,658 + Echvi_0808 0.12 -0.5 922,659 - Echvi_0808 0.12 +1.5 922,659 - Echvi_0808 0.12 -1.0 922,660 + Echvi_0808 0.13 +0.6 922,661 - Echvi_0808 0.13 +0.1 922,661 - Echvi_0808 0.13 +0.3 922,661 - Echvi_0808 0.13 +0.4 922,661 - Echvi_0808 0.13 +0.8 922,661 - +0.8 922,661 - Echvi_0808 0.13 -0.0 922,661 - Echvi_0808 0.13 +0.0 922,661 - Echvi_0808 0.13 -0.2 922,664 + Echvi_0808 0.13 -0.5 922,665 - Echvi_0808 0.13 +0.2 922,665 - Echvi_0808 0.13 -0.5 922,668 - Echvi_0808 0.13 -1.2 922,669 + Echvi_0808 0.13 +1.8 922,670 - Echvi_0808 0.13 -1.3 922,673 + Echvi_0808 0.13 +0.7 922,687 + Echvi_0808 0.14 -1.4 922,693 - Echvi_0808 0.14 -0.4 922,703 + Echvi_0808 0.14 +0.2 922,703 + Echvi_0808 0.14 +1.8 922,703 + Echvi_0808 0.14 +0.5 922,712 - Echvi_0808 0.15 +0.4 922,735 + Echvi_0808 0.15 -0.7 922,766 + Echvi_0808 0.17 -1.4 922,767 - Echvi_0808 0.17 +0.3 922,769 + Echvi_0808 0.17 +0.2 922,769 + Echvi_0808 0.17 -0.5 922,769 + Echvi_0808 0.17 +0.0 922,770 - Echvi_0808 0.17 -0.1 922,770 - Echvi_0808 0.17 +0.8 922,770 - Echvi_0808 0.17 -0.8 922,770 - Echvi_0808 0.17 +0.4 922,795 - Echvi_0808 0.18 -0.2 922,797 + Echvi_0808 0.18 -0.6 922,797 + Echvi_0808 0.18 +0.8 922,798 - Echvi_0808 0.18 +2.2 922,798 - Echvi_0808 0.18 -0.0 922,798 - Echvi_0808 0.18 -0.9 922,798 - Echvi_0808 0.18 -0.2 922,845 + Echvi_0808 0.20 -0.4 922,846 - Echvi_0808 0.20 +0.5 922,846 - Echvi_0808 0.20 +0.9 922,846 - Echvi_0808 0.20 -0.6 922,848 + Echvi_0808 0.20 -0.5 922,849 - Echvi_0808 0.20 +2.1 922,871 + Echvi_0808 0.21 +0.2 922,872 - Echvi_0808 0.21 +0.9 922,885 + Echvi_0808 0.21 -0.8 922,888 + Echvi_0808 0.21 -0.2 922,889 - Echvi_0808 0.21 -0.5 922,889 - Echvi_0808 0.21 +0.8 922,889 - Echvi_0808 0.21 +0.7
Or see this region's nucleotide sequence