Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0210

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
228,729	+		Echvi_0209	0.20	-0.2
228,730	-		Echvi_0209	0.20	-0.1
228,736	-		Echvi_0209	0.20	-0.0
228,760	+		Echvi_0209	0.23	-1.5
228,767	+		Echvi_0209	0.23	+0.2
228,814	-		Echvi_0209	0.28	-1.2
229,021	+		Echvi_0209	0.47	-1.6
229,039	+		Echvi_0209	0.48	-0.7
229,120	+		Echvi_0209	0.56	+0.8
229,120	+		Echvi_0209	0.56	-0.3
229,121	-		Echvi_0209	0.56	-1.2
229,130	+		Echvi_0209	0.57	-0.6
229,130	+		Echvi_0209	0.57	-0.7
229,130	+		Echvi_0209	0.57	+0.9
229,130	+		Echvi_0209	0.57	+1.0
229,170	-		Echvi_0209	0.60	+0.4
229,186	+		Echvi_0209	0.62	+0.9
229,206	+		Echvi_0209	0.64	-0.2
229,207	-		Echvi_0209	0.64	+1.3
229,242	+		Echvi_0209	0.67	-0.3
229,243	-		Echvi_0209	0.67	-1.6
229,318	-		Echvi_0209	0.74	-0.5
229,336	-		Echvi_0209	0.75	+0.8
229,346	-		Echvi_0209	0.76	-0.0
229,375	+		Echvi_0209	0.79	-0.7
229,376	-		Echvi_0209	0.79	-1.2
229,408	-		Echvi_0209	0.82	-0.3
229,443	+		Echvi_0209	0.85	-0.3
229,443	+		Echvi_0209	0.85	-0.6
229,500	+				-1.0
229,501	-				-0.6
229,501	-				+0.3
229,501	-				+2.0
229,543	+				+0.3
229,544	-				+1.2
229,579	-				-1.4
229,583	-				+0.1
229,627	+				+0.4
229,642	+				+0.2
229,760	+				+0.1
229,763	+				+1.1
229,763	+				-0.6
229,764	-				-0.4
229,791	-				+0.5
229,827	-		Echvi_0210	0.14	+1.1
229,831	-		Echvi_0210	0.14	+1.3
229,934	+		Echvi_0210	0.25	-0.0
229,963	+		Echvi_0210	0.28	-0.4
229,964	-		Echvi_0210	0.28	-1.3
229,965	+		Echvi_0210	0.28	+0.2
229,965	+		Echvi_0210	0.28	-0.7
229,965	+		Echvi_0210	0.28	-1.0
230,118	+		Echvi_0210	0.44	-1.3
230,183	+		Echvi_0210	0.51	+0.4
230,184	-		Echvi_0210	0.51	+1.1
230,184	-		Echvi_0210	0.51	-1.3
230,184	-		Echvi_0210	0.51	+1.3
230,184	-		Echvi_0210	0.51	-0.4
230,248	+		Echvi_0210	0.58	+0.7
230,249	-		Echvi_0210	0.58	+1.4
230,249	-		Echvi_0210	0.58	+0.6
230,249	-		Echvi_0210	0.58	-0.3
230,271	-		Echvi_0210	0.61	-0.5
230,274	+		Echvi_0210	0.61	+1.2
230,274	+		Echvi_0210	0.61	-0.1
230,274	+		Echvi_0210	0.61	-0.8
230,274	+		Echvi_0210	0.61	-0.7
230,275	-		Echvi_0210	0.61	+0.4
230,326	+		Echvi_0210	0.66	-0.2
230,326	+		Echvi_0210	0.66	+1.4
230,326	+		Echvi_0210	0.66	-0.1
230,326	+		Echvi_0210	0.66	-0.6
230,326	+		Echvi_0210	0.66	+0.5
230,327	-		Echvi_0210	0.67	+1.7
230,327	-		Echvi_0210	0.67	+0.0
230,327	-		Echvi_0210	0.67	+0.1
230,327	-		Echvi_0210	0.67	+0.2
230,349	-		Echvi_0210	0.69	+0.2
230,349	-		Echvi_0210	0.69	+0.3
230,361	+		Echvi_0210	0.70	+0.5
230,361	+		Echvi_0210	0.70	+0.8
230,362	-		Echvi_0210	0.70	-0.1
230,379	-		Echvi_0210	0.72	+0.1
230,385	-		Echvi_0210	0.73	-1.1
230,428	-		Echvi_0210	0.77	-1.9
230,659	-				+0.7
230,691	+				+0.4
230,861	+		Echvi_0211	0.15	+1.3
230,861	+		Echvi_0211	0.15	-0.1
230,862	-		Echvi_0211	0.15	+0.2
231,155	+		Echvi_0211	0.78	-0.1
231,155	+		Echvi_0211	0.78	-1.0
231,156	-		Echvi_0211	0.78	+0.1
231,181	+		Echvi_0211	0.83	+0.4
231,232	+				-1.7
231,262	-				-1.6
231,267	-				+0.5
231,267	-				+0.1
231,295	+				+0.7
231,296	-				-0.8
231,381	+				+0.7
231,381	+				-0.5
231,382	-				+0.7
231,382	-				+0.3
231,385	-		Echvi_0212	0.10	+0.1
231,458	-		Echvi_0212	0.16	-0.5
231,458	-		Echvi_0212	0.16	-0.3
231,617	+		Echvi_0212	0.29	+3.3
231,618	-		Echvi_0212	0.29	-1.1
231,622	+		Echvi_0212	0.29	+0.4
231,623	-		Echvi_0212	0.29	-0.9