Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0117

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
113,329	+		Echvi_0116	0.36	-0.5
113,330	-		Echvi_0116	0.36	+0.1
113,355	+		Echvi_0116	0.38	-0.1
113,403	+				+0.6
113,404	-		Echvi_0116	0.42	-0.2
113,564	-		Echvi_0116	0.55	-0.6
113,564	-		Echvi_0116	0.55	+0.4
113,608	+		Echvi_0116	0.59	-0.2
113,807	-		Echvi_0116	0.75	-0.5
113,913	+		Echvi_0116	0.84	-1.4
113,914	-		Echvi_0116	0.84	-0.3
113,950	+		Echvi_0116	0.87	+0.6
113,956	-		Echvi_0116	0.87	-1.1
114,022	-				-1.6
114,022	-				-1.0
114,022	-				-0.4
114,022	-				+0.3
114,118	-				+0.3
114,238	+				-0.4
114,256	+				-1.4
114,328	-				+0.8
114,380	+				-0.7
114,381	-				+1.1
114,381	-				-0.6
114,397	+				+1.6
114,541	-		Echvi_0117	0.11	+0.0
114,671	+		Echvi_0117	0.18	-0.0
114,671	+		Echvi_0117	0.18	+0.3
114,833	+		Echvi_0117	0.25	-1.3
114,833	+		Echvi_0117	0.25	-0.4
114,834	-		Echvi_0117	0.25	+0.1
114,855	+		Echvi_0117	0.26	-0.6
114,855	+		Echvi_0117	0.26	-0.4
114,855	+		Echvi_0117	0.26	+0.8
114,856	-		Echvi_0117	0.26	+0.6
114,856	-		Echvi_0117	0.26	+0.6
114,856	-		Echvi_0117	0.26	-0.5
114,857	+		Echvi_0117	0.27	-0.7
114,857	+		Echvi_0117	0.27	-1.3
114,857	+		Echvi_0117	0.27	+0.1
114,858	-		Echvi_0117	0.27	-0.1
114,858	-		Echvi_0117	0.27	+1.4
114,858	-		Echvi_0117	0.27	+0.3
114,912	+		Echvi_0117	0.29	+0.2
114,918	+		Echvi_0117	0.30	+0.0
114,918	+		Echvi_0117	0.30	-1.2
114,920	+		Echvi_0117	0.30	-0.4
114,920	+		Echvi_0117	0.30	+0.7
114,921	-		Echvi_0117	0.30	+0.2
114,921	-		Echvi_0117	0.30	-1.2
114,949	-		Echvi_0117	0.31	+1.2
115,038	-		Echvi_0117	0.35	+0.6
115,079	+		Echvi_0117	0.37	+0.4
115,116	+		Echvi_0117	0.39	+0.0
115,117	-		Echvi_0117	0.39	+1.1
115,153	-		Echvi_0117	0.41	-0.1
115,206	+		Echvi_0117	0.43	+0.5
115,206	+		Echvi_0117	0.43	+0.0
115,207	-		Echvi_0117	0.44	+0.4
115,276	+		Echvi_0117	0.47	+0.3
115,276	+		Echvi_0117	0.47	+0.4
115,276	+		Echvi_0117	0.47	-0.7
115,276	+		Echvi_0117	0.47	-0.3
115,278	+		Echvi_0117	0.47	-0.4
115,279	-		Echvi_0117	0.47	-0.6
115,483	+		Echvi_0117	0.57	-0.9
115,483	+		Echvi_0117	0.57	-1.0
115,483	+		Echvi_0117	0.57	+0.0
115,601	+		Echvi_0117	0.63	-0.0
115,602	-		Echvi_0117	0.63	-0.1
115,605	+		Echvi_0117	0.63	+0.7
115,605	+		Echvi_0117	0.63	+1.4
115,605	+		Echvi_0117	0.63	-0.8
115,605	+		Echvi_0117	0.63	-1.2
115,605	+		Echvi_0117	0.63	+0.9
115,606	-		Echvi_0117	0.63	+0.0
115,606	-		Echvi_0117	0.63	+0.6
115,606	-		Echvi_0117	0.63	+1.0
115,606	-		Echvi_0117	0.63	+0.1
115,648	-		Echvi_0117	0.65	+1.0
115,648	-		Echvi_0117	0.65	+0.4
115,718	+		Echvi_0117	0.68	+0.3
115,800	-		Echvi_0117	0.72	+1.2
115,802	+		Echvi_0117	0.72	-0.6
115,803	-		Echvi_0117	0.72	+0.6
115,803	-		Echvi_0117	0.72	+1.0
115,840	-		Echvi_0117	0.74	+0.1
115,840	-		Echvi_0117	0.74	+0.2
115,841	+		Echvi_0117	0.74	+0.4
115,931	+		Echvi_0117	0.79	+0.3
116,127	+		Echvi_0117	0.88	-0.1
116,127	+		Echvi_0117	0.88	+0.8
116,149	-		Echvi_0117	0.89	+0.9
116,317	+				+0.5
116,318	-				-0.2
116,318	-				-0.8
116,326	-				+1.1
116,326	-				-0.8
116,375	+				+2.4
116,376	-				+0.8
116,376	-				+0.0
116,377	+				+0.9
116,378	-				+0.0
116,379	+				+0.2