Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4302

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
5,140,907	+		Echvi_4300	0.12	+0.2
5,140,907	+		Echvi_4300	0.12	+0.7
5,140,985	+		Echvi_4300	0.26	+0.1
5,141,042	+		Echvi_4300	0.37	-0.4
5,141,042	+		Echvi_4300	0.37	-0.3
5,141,042	+		Echvi_4300	0.37	+0.4
5,141,042	+		Echvi_4300	0.37	-0.4
5,141,043	-		Echvi_4300	0.37	+0.1
5,141,043	-		Echvi_4300	0.37	-0.1
5,141,055	+		Echvi_4300	0.39	+0.3
5,141,055	+		Echvi_4300	0.39	-1.8
5,141,055	+		Echvi_4300	0.39	+1.3
5,141,056	-		Echvi_4300	0.39	+0.3
5,141,067	-		Echvi_4300	0.41	-0.4
5,141,131	+		Echvi_4300	0.53	+0.7
5,141,135	+		Echvi_4300	0.54	-0.1
5,141,136	-		Echvi_4300	0.54	+0.2
5,141,136	-		Echvi_4300	0.54	-0.0
5,141,273	-		Echvi_4300	0.79	-1.1
5,141,279	+		Echvi_4300	0.80	-0.4
5,141,280	-		Echvi_4300	0.80	+0.1
5,141,330	+		Echvi_4300	0.89	+0.2
5,141,330	+		Echvi_4300	0.89	-2.2
5,141,334	+		Echvi_4300	0.90	+0.3
5,141,334	+		Echvi_4300	0.90	+0.7
5,141,334	+		Echvi_4300	0.90	+0.7
5,141,335	-				-0.4
5,141,335	-				+2.7
5,141,371	+				-0.9
5,141,371	+				+1.0
5,141,371	+				-0.5
5,141,372	-				-0.0
5,141,372	-				-1.2
5,141,372	-				+0.1
5,141,372	-				-1.6
5,141,374	-				-0.2
5,141,374	-				-0.5
5,141,375	+				+1.3
5,141,375	+				+0.8
5,141,375	+				+0.1
5,141,375	+				-0.6
5,141,375	+				+0.4
5,141,375	+				-0.4
5,141,375	+				-0.4
5,141,375	+				-0.8
5,141,375	+				+0.0
5,141,376	-				-0.9
5,141,376	-				+2.7
5,141,376	-				+1.7
5,141,376	-				+0.1
5,141,376	-				-1.2
5,141,389	+				+0.1
5,141,389	+				-0.3
5,141,408	-				+0.1
5,141,416	+				-0.1
5,141,417	-				+0.1
5,141,433	+				+0.3
5,141,439	+		Echvi_4301	0.11	-0.0
5,141,440	-		Echvi_4301	0.11	-0.3
5,141,440	-		Echvi_4301	0.11	-0.1
5,141,473	-		Echvi_4301	0.17	-0.9
5,141,478	+		Echvi_4301	0.18	+0.6
5,141,501	-		Echvi_4301	0.23	+0.3
5,141,502	+		Echvi_4301	0.23	+0.3
5,141,503	-		Echvi_4301	0.23	+0.5
5,141,503	-		Echvi_4301	0.23	+0.9
5,141,503	-		Echvi_4301	0.23	-1.0
5,141,527	-		Echvi_4301	0.28	+1.4
5,141,563	+		Echvi_4301	0.36	+0.7
5,141,616	-		Echvi_4301	0.46	-1.2
5,141,617	+		Echvi_4301	0.46	-0.1
5,141,686	+		Echvi_4301	0.60	+0.7
5,141,784	+		Echvi_4301	0.80	+0.0
5,141,784	+		Echvi_4301	0.80	-1.3
5,141,784	+		Echvi_4301	0.80	-0.1
5,141,785	-		Echvi_4301	0.80	-0.9
5,141,841	+				+0.4
5,141,841	+				-0.2
5,141,841	+				-0.0
5,141,903	-				+1.2
5,141,903	-				+0.8
5,141,925	+				+0.4
5,141,930	+				-1.3
5,141,931	-				+0.2
5,141,931	-				+1.2
5,141,937	+				+0.3
5,141,958	-				-0.4
5,142,042	+		Echvi_4302	0.13	-0.8
5,142,087	-		Echvi_4302	0.17	+0.0
5,142,114	-		Echvi_4302	0.20	+1.1
5,142,132	-		Echvi_4302	0.22	-1.0
5,142,218	+		Echvi_4302	0.30	-0.8
5,142,218	+		Echvi_4302	0.30	+0.5
5,142,218	+		Echvi_4302	0.30	-1.5
5,142,218	+		Echvi_4302	0.30	-1.2
5,142,225	+		Echvi_4302	0.30	-0.2
5,142,226	-		Echvi_4302	0.30	-1.1
5,142,233	-		Echvi_4302	0.31	-0.1
5,142,301	+		Echvi_4302	0.37	-0.0
5,142,306	-		Echvi_4302	0.38	-0.4
5,142,412	+		Echvi_4302	0.48	-0.9
5,142,431	+		Echvi_4302	0.49	-1.3
5,142,511	+		Echvi_4302	0.57	+0.6
5,142,512	-		Echvi_4302	0.57	-0.6
5,142,537	-		Echvi_4302	0.59	+0.1
5,142,598	+		Echvi_4302	0.65	-0.1
5,142,599	-		Echvi_4302	0.65	-0.5
5,142,599	-		Echvi_4302	0.65	+0.4
5,142,698	-		Echvi_4302	0.74	-0.9
5,142,698	-		Echvi_4302	0.74	+0.1
5,142,746	+		Echvi_4302	0.79	-0.1
5,142,747	-		Echvi_4302	0.79	-0.7
5,142,750	-		Echvi_4302	0.79	-0.9
5,142,799	+		Echvi_4302	0.83	+0.1
5,142,799	+		Echvi_4302	0.83	-0.9
5,142,800	-		Echvi_4302	0.84	-0.0
5,142,801	+		Echvi_4302	0.84	-0.6
5,142,802	-		Echvi_4302	0.84	-0.2
5,142,802	-		Echvi_4302	0.84	-1.6
5,142,841	+		Echvi_4302	0.87	+0.8
5,142,842	-		Echvi_4302	0.87	+0.7
5,142,984	+				+1.2
5,142,996	+				+1.7
5,143,027	-				+0.2
5,143,039	+				+0.8
5,143,040	-				-0.9
5,143,040	-				-0.3
5,143,051	+				-0.1
5,143,062	+				-2.2
5,143,063	-				+0.2
5,143,063	-				+0.4
5,143,175	+		Echvi_4303	0.25	-1.0
5,143,175	+		Echvi_4303	0.25	-0.2
5,143,241	+		Echvi_4303	0.36	-0.6
5,143,242	-		Echvi_4303	0.37	+0.3
5,143,272	+		Echvi_4303	0.42	+0.6
5,143,335	-		Echvi_4303	0.53	-1.8
5,143,367	+		Echvi_4303	0.59	+0.6
5,143,371	-		Echvi_4303	0.60	-2.1
5,143,398	+		Echvi_4303	0.65	-0.7
5,143,398	+		Echvi_4303	0.65	-1.8
5,143,403	+		Echvi_4303	0.65	+1.7
5,143,429	+		Echvi_4303	0.70	-0.8
5,143,429	+		Echvi_4303	0.70	+0.2
5,143,454	+		Echvi_4303	0.75	+1.7
5,143,454	+		Echvi_4303	0.75	-0.4
5,143,454	+		Echvi_4303	0.75	+1.3
5,143,454	+		Echvi_4303	0.75	-0.7
5,143,455	-		Echvi_4303	0.75	+1.1
5,143,482	-		Echvi_4303	0.80	+0.1
5,143,541	+				+0.3
5,143,542	-				+1.0
5,143,550	+				+2.7
5,143,551	-				+0.4
5,143,551	-				-0.2
5,143,576	+				+0.3
5,143,584	+				-1.5
5,143,598	+				-0.9
5,143,598	+				+0.4
5,143,598	+				-1.2
5,143,598	+				-1.2
5,143,599	-				+4.0
5,143,599	-				-0.4
5,143,618	+				+1.0
5,143,761	+				+0.5
5,143,797	+		Echvi_4304	0.11	+0.1
5,143,797	+		Echvi_4304	0.11	-0.2
5,143,797	+		Echvi_4304	0.11	+0.4
5,143,810	+		Echvi_4304	0.13	+0.5
5,143,822	-		Echvi_4304	0.14	+0.9
5,143,822	-		Echvi_4304	0.14	-0.7
5,143,827	+		Echvi_4304	0.15	-0.2
5,143,828	-		Echvi_4304	0.15	-0.3
5,143,888	+		Echvi_4304	0.23	+0.7
5,143,888	+		Echvi_4304	0.23	-0.4
5,143,888	+		Echvi_4304	0.23	+0.1
5,143,888	+		Echvi_4304	0.23	-1.4
5,143,888	+		Echvi_4304	0.23	+1.7
5,143,890	+		Echvi_4304	0.23	+0.0
5,143,890	+		Echvi_4304	0.23	-0.8
5,143,891	-		Echvi_4304	0.23	-0.9
5,143,891	-		Echvi_4304	0.23	+0.1
5,143,923	+		Echvi_4304	0.27	+0.1
5,143,924	-		Echvi_4304	0.27	-0.4
5,143,963	-		Echvi_4304	0.32	-2.6