Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3885

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,641,846	-		Echvi_3884	0.70	-2.8
4,641,850	+		Echvi_3884	0.70	-0.2
4,641,853	+		Echvi_3884	0.70	-0.4
4,641,854	-		Echvi_3884	0.70	+0.1
4,641,885	-		Echvi_3884	0.71	+1.1
4,641,917	+		Echvi_3884	0.72	+0.4
4,641,920	+		Echvi_3884	0.72	+1.5
4,641,936	-		Echvi_3884	0.73	-0.6
4,642,208	-		Echvi_3884	0.83	-0.4
4,642,208	-		Echvi_3884	0.83	-0.3
4,642,245	-		Echvi_3884	0.84	+0.1
4,642,246	+		Echvi_3884	0.84	+0.6
4,642,316	+		Echvi_3884	0.87	-1.1
4,642,325	+		Echvi_3884	0.87	-0.5
4,642,326	-		Echvi_3884	0.87	-0.4
4,642,374	-		Echvi_3884	0.89	+0.0
4,642,465	+				+0.8
4,642,473	+				-0.3
4,642,474	-				-1.2
4,642,520	+				-1.5
4,642,521	-				+0.7
4,642,521	-				-0.4
4,642,697	-				-0.3
4,642,712	+				+0.1
4,642,756	-				+0.6
4,642,756	-				+0.9
4,642,799	+				+0.6
4,642,835	-				-0.2
4,642,835	-				+1.0
4,642,878	+				+0.5
4,642,888	+				-0.5
4,642,888	+				-0.3
4,642,898	+		Echvi_3885	0.11	+0.0
4,642,933	+		Echvi_3885	0.17	+0.1
4,642,980	+		Echvi_3885	0.26	-1.0
4,642,980	+		Echvi_3885	0.26	-1.5
4,642,981	-		Echvi_3885	0.26	+0.0
4,642,981	-		Echvi_3885	0.26	-1.3
4,642,981	-		Echvi_3885	0.26	-1.2
4,642,981	-		Echvi_3885	0.26	-0.8
4,642,984	+		Echvi_3885	0.27	-0.6
4,642,984	+		Echvi_3885	0.27	-1.0
4,642,985	-		Echvi_3885	0.27	-1.8
4,642,985	-		Echvi_3885	0.27	+0.1
4,643,135	+		Echvi_3885	0.55	+0.2
4,643,153	-		Echvi_3885	0.58	-1.4
4,643,155	+		Echvi_3885	0.58	-0.9
4,643,156	-		Echvi_3885	0.59	-1.0
4,643,200	+		Echvi_3885	0.67	-0.0
4,643,327	+				-0.1
4,643,390	+				-0.2
4,643,395	+				-0.2
4,643,395	+				-1.0
4,643,395	+				-1.0
4,643,395	+				+0.1
4,643,396	-				+0.6
4,643,396	-				-0.8
4,643,402	-				+0.9
4,643,407	-				+1.5
4,643,413	-				-2.4
4,643,426	+				+0.1
4,643,427	-				+1.0
4,643,429	-				+0.6
4,643,451	+				-0.3
4,643,596	-				+0.5
4,643,643	+				+0.5
4,643,644	-				-0.6