Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3642

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,326,678	-		Echvi_3640	0.85	+1.5
4,326,678	-		Echvi_3640	0.85	-1.3
4,326,768	-				-0.2
4,326,772	+				+0.0
4,326,772	+				-0.8
4,326,772	+				+1.7
4,326,773	-				-0.9
4,326,773	-				+0.2
4,326,775	+				+0.2
4,326,776	-				+1.3
4,326,903	+				-0.3
4,326,904	-				-1.4
4,326,905	+				-0.3
4,326,910	+				-0.2
4,326,936	+				+0.6
4,326,938	+				+0.3
4,326,956	+				-0.4
4,326,956	+				+0.5
4,326,957	-				+0.7
4,326,960	+				+0.0
4,326,960	+				+0.9
4,326,961	-				-0.1
4,326,964	-				+0.8
4,327,010	+				-0.3
4,327,071	+				-0.9
4,327,144	-				+0.5
4,327,144	-				-2.5
4,327,145	+				-1.8
4,327,145	+				-1.7
4,327,146	-				+0.9
4,327,146	-				+0.0
4,327,148	+				+0.2
4,327,150	+				+0.2
4,327,151	-				-0.9
4,327,153	+				-0.6
4,327,153	+				-0.1
4,327,153	+				-2.8
4,327,154	-				-0.8
4,327,175	+				+0.7
4,327,175	+				+0.4
4,327,175	+				+0.4
4,327,175	+				-0.8
4,327,204	-				+0.3
4,327,209	+				-1.1
4,327,210	-				-0.3
4,327,283	+		Echvi_3641	0.24	+0.1
4,327,317	+		Echvi_3641	0.35	-0.1
4,327,352	-		Echvi_3641	0.46	+0.5
4,327,434	-		Echvi_3641	0.71	+0.5
4,327,453	+		Echvi_3641	0.77	+1.0
4,327,454	-		Echvi_3641	0.77	-0.4
4,327,511	+				+0.3
4,327,512	-				+0.5
4,327,528	+				+0.4
4,327,529	-				-0.8
4,327,529	-				+0.2
4,327,538	-				+0.4
4,327,538	-				-0.0
4,327,538	-				-1.4
4,327,548	+				-0.8
4,327,560	+				-1.0
4,327,560	+				-2.3
4,327,561	-				-0.3
4,327,561	-				-0.8
4,327,561	-				+0.3
4,327,582	-				+0.4
4,327,587	+				-1.1
4,327,588	-				+2.5
4,327,588	-				-0.8
4,327,588	-				+0.1
4,327,604	+				+0.5
4,327,609	+				-0.8
4,327,609	+				-1.2
4,327,610	-				+0.2
4,327,682	+		Echvi_3642	0.29	+0.0
4,327,740	-		Echvi_3642	0.52	-1.4
4,327,800	-		Echvi_3642	0.75	-2.0
4,327,864	+				-0.2
4,327,864	+				+0.5
4,327,864	+				+0.1
4,327,864	+				+0.3
4,327,865	-				-0.7
4,327,865	-				-0.5
4,327,909	+				+1.5
4,327,910	-				+0.7
4,327,910	-				+1.2
4,327,918	+				+1.1
4,327,918	+				-0.7
4,327,918	+				-2.4
4,327,918	+				+0.3
4,327,918	+				+0.3
4,327,919	-				-0.1
4,327,919	-				-0.1
4,327,992	+				-2.5
4,327,993	-				-0.3
4,328,020	-		Echvi_3643	0.12	-2.0
4,328,048	-		Echvi_3643	0.14	+0.1
4,328,071	+		Echvi_3643	0.16	+0.9
4,328,071	+		Echvi_3643	0.16	-0.4
4,328,072	-		Echvi_3643	0.16	+0.3
4,328,082	+		Echvi_3643	0.17	-0.5
4,328,083	-		Echvi_3643	0.17	-0.0
4,328,087	+		Echvi_3643	0.17	-1.0
4,328,087	+		Echvi_3643	0.17	+0.3
4,328,087	+		Echvi_3643	0.17	+0.8
4,328,087	+		Echvi_3643	0.17	-0.4
4,328,087	+		Echvi_3643	0.17	-0.6
4,328,088	-		Echvi_3643	0.17	-0.1
4,328,094	+		Echvi_3643	0.18	+0.7
4,328,095	-		Echvi_3643	0.18	+0.8
4,328,112	+		Echvi_3643	0.19	-0.7
4,328,112	+		Echvi_3643	0.19	-0.5
4,328,130	+		Echvi_3643	0.21	+0.7
4,328,149	-		Echvi_3643	0.22	-0.1
4,328,176	-		Echvi_3643	0.24	+0.5
4,328,194	+		Echvi_3643	0.26	+0.1
4,328,194	+		Echvi_3643	0.26	-0.2
4,328,202	+		Echvi_3643	0.27	-0.3
4,328,202	+		Echvi_3643	0.27	-0.0
4,328,203	-		Echvi_3643	0.27	+0.0
4,328,203	-		Echvi_3643	0.27	+0.1
4,328,338	+		Echvi_3643	0.37	-0.5
4,328,374	-		Echvi_3643	0.40	+0.1
4,328,406	+		Echvi_3643	0.43	+0.7
4,328,421	+		Echvi_3643	0.44	-1.2
4,328,422	-		Echvi_3643	0.44	-0.2
4,328,435	+		Echvi_3643	0.45	-0.4
4,328,436	-		Echvi_3643	0.45	+1.2
4,328,523	-		Echvi_3643	0.52	+0.7
4,328,552	-		Echvi_3643	0.54	-1.3
4,328,609	+		Echvi_3643	0.59	+0.1
4,328,609	+		Echvi_3643	0.59	-0.5
4,328,678	+		Echvi_3643	0.65	-0.6
4,328,782	-		Echvi_3643	0.73	-0.0
4,328,850	-		Echvi_3643	0.78	+0.6
4,328,850	-		Echvi_3643	0.78	-0.9
4,328,858	+		Echvi_3643	0.79	-0.1
4,328,859	-		Echvi_3643	0.79	+0.5
4,328,859	-		Echvi_3643	0.79	+0.2
4,328,862	+		Echvi_3643	0.79	-0.9
4,328,862	+		Echvi_3643	0.79	+0.7
4,328,862	+		Echvi_3643	0.79	+0.5