Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3183

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,787,439	-		Echvi_3182	0.61	+0.5
3,787,534	+		Echvi_3182	0.65	-1.3
3,787,534	+		Echvi_3182	0.65	-0.1
3,787,593	+		Echvi_3182	0.68	+1.4
3,787,594	-		Echvi_3182	0.68	+1.2
3,787,603	-		Echvi_3182	0.68	-1.2
3,787,626	-		Echvi_3182	0.69	-1.1
3,787,676	+		Echvi_3182	0.71	+0.6
3,787,792	+		Echvi_3182	0.76	+3.5
3,787,792	+		Echvi_3182	0.76	-1.3
3,787,824	-		Echvi_3182	0.77	-1.5
3,787,828	+		Echvi_3182	0.77	-0.6
3,787,829	-		Echvi_3182	0.77	-0.4
3,787,829	-		Echvi_3182	0.77	-0.5
3,787,833	+		Echvi_3182	0.77	-0.3
3,787,833	+		Echvi_3182	0.77	-0.3
3,787,833	+		Echvi_3182	0.77	-0.3
3,787,865	-		Echvi_3182	0.78	+0.7
3,787,874	-		Echvi_3182	0.79	-0.1
3,787,874	-		Echvi_3182	0.79	-0.2
3,787,903	+		Echvi_3182	0.80	+0.5
3,787,904	-		Echvi_3182	0.80	-0.7
3,787,972	+		Echvi_3182	0.83	-1.4
3,788,038	+		Echvi_3182	0.85	-3.4
3,788,071	-		Echvi_3182	0.87	+0.9
3,788,071	-		Echvi_3182	0.87	-0.6
3,788,163	+				-0.3
3,788,163	+				+0.6
3,788,164	-				-0.2
3,788,178	+				-0.6
3,788,179	-				-0.1
3,788,179	-				-0.4
3,788,271	-				+0.1
3,788,404	+				-1.2
3,788,405	-				-1.3
3,788,431	+				-1.2
3,788,431	+				-0.5
3,788,586	+		Echvi_3183	0.56	-2.0
3,788,588	+		Echvi_3183	0.56	-1.4
3,788,588	+		Echvi_3183	0.56	-0.1
3,788,609	+		Echvi_3183	0.62	+0.3
3,788,610	-		Echvi_3183	0.63	-1.3
3,788,632	+		Echvi_3183	0.69	-0.0
3,788,632	+		Echvi_3183	0.69	-0.4
3,788,633	-		Echvi_3183	0.70	-1.3
3,788,666	+		Echvi_3183	0.80	-0.7
3,788,723	+				-0.5
3,788,723	+				+0.3
3,788,723	+				+1.5
3,788,723	+				+0.1
3,788,724	-				-0.4
3,788,724	-				+0.7
3,788,724	-				-0.8
3,788,727	+				+1.9
3,788,734	-				+0.9
3,788,858	-		Echvi_3184	0.37	+0.1
3,788,864	+		Echvi_3184	0.39	+0.1
3,788,864	+		Echvi_3184	0.39	-1.3
3,788,865	-		Echvi_3184	0.39	-0.7
3,788,907	-		Echvi_3184	0.52	-1.1
3,788,930	-		Echvi_3184	0.60	-0.1
3,789,134	+				-2.9
3,789,134	+				-0.1
3,789,136	+				-0.1
3,789,136	+				-0.6
3,789,137	-				-1.0
3,789,137	-				+0.4
3,789,137	-				-0.1
3,789,137	-				-0.1
3,789,137	-				-1.0
3,789,140	+				+0.0
3,789,140	+				-0.2
3,789,161	-				-0.7
3,789,180	+				+0.8
3,789,181	-				-0.3
3,789,181	-				+1.5
3,789,217	+				-0.3
3,789,225	-				+0.5
3,789,225	-				-0.4
3,789,246	+				-1.5
3,789,246	+				+0.3
3,789,274	+				+0.3
3,789,299	-				+0.6
3,789,299	-				+0.0
3,789,299	-				-0.7
3,789,302	+				+0.8
3,789,302	+				+0.2
3,789,303	-				+0.7
3,789,303	-				-0.9
3,789,307	+				-1.1
3,789,393	-		Echvi_3185	0.15	+0.9
3,789,402	+		Echvi_3185	0.17	-0.6
3,789,403	-		Echvi_3185	0.17	+0.8
3,789,404	+				+0.5
3,789,404	+		Echvi_3185	0.17	-0.6
3,789,404	+		Echvi_3185	0.17	-0.0
3,789,409	-		Echvi_3185	0.18	+0.1
3,789,409	-		Echvi_3185	0.18	+0.1
3,789,497	-		Echvi_3185	0.29	-0.4
3,789,502	+		Echvi_3185	0.30	-0.1
3,789,502	+		Echvi_3185	0.30	+1.3
3,789,503	-		Echvi_3185	0.30	+0.5
3,789,542	+		Echvi_3185	0.35	-0.4
3,789,543	-		Echvi_3185	0.35	-0.6
3,789,548	+		Echvi_3185	0.36	-0.6
3,789,549	-		Echvi_3185	0.36	-1.8
3,789,578	+		Echvi_3185	0.40	-0.9
3,789,605	+		Echvi_3185	0.44	-0.4
3,789,606	-		Echvi_3185	0.44	-0.5
3,789,620	+		Echvi_3185	0.46	-0.2
3,789,620	+		Echvi_3185	0.46	+0.2
3,789,631	-		Echvi_3185	0.47	-0.1
3,789,638	-		Echvi_3185	0.48	+0.3
3,789,652	+		Echvi_3185	0.50	+0.4