Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3117

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,725,052	+				-2.1
3,725,054	+				-0.3
3,725,055	-				+0.4
3,725,116	+				+0.9
3,725,164	+				+1.2
3,725,264	-		Echvi_3116	0.26	-1.4
3,725,264	-		Echvi_3116	0.26	+0.5
3,725,264	-		Echvi_3116	0.26	-0.2
3,725,401	+		Echvi_3116	0.49	+0.1
3,725,437	+		Echvi_3116	0.55	-0.1
3,725,510	-		Echvi_3116	0.67	+0.7
3,725,510	-		Echvi_3116	0.67	-2.0
3,725,510	-		Echvi_3116	0.67	+0.2
3,725,510	-		Echvi_3116	0.67	+0.4
3,725,510	-		Echvi_3116	0.67	+0.9
3,725,525	+		Echvi_3116	0.69	+0.6
3,725,544	+		Echvi_3116	0.72	-1.8
3,725,544	+		Echvi_3116	0.72	+1.3
3,725,544	+		Echvi_3116	0.72	+0.1
3,725,545	-		Echvi_3116	0.72	-0.8
3,725,556	+		Echvi_3116	0.74	-0.5
3,725,557	-		Echvi_3116	0.74	+0.2
3,725,646	+		Echvi_3116	0.89	-0.7
3,725,649	+		Echvi_3116	0.90	-0.3
3,725,649	+		Echvi_3116	0.90	-0.2
3,725,649	+		Echvi_3116	0.90	-0.5
3,725,649	+		Echvi_3116	0.90	+0.4
3,725,649	+		Echvi_3116	0.90	+1.2
3,725,650	-				-1.2
3,725,650	-				+0.1
3,725,650	-				+0.4
3,725,650	-				+0.9
3,725,654	+				-0.1
3,725,654	+				-0.7
3,725,678	-				-0.1
3,725,699	-				-0.3
3,725,715	-				+1.2
3,725,754	+				-0.4
3,725,754	+				+0.3
3,725,755	-				-0.7
3,725,785	-				-1.0
3,725,803	+				+1.0
3,725,814	+				-0.0
3,725,851	+				+0.2
3,725,852	-				-0.4
3,725,852	-				-0.2
3,725,886	-				-1.1
3,725,938	+				+3.5
3,725,939	-				-0.8
3,725,939	-				-1.1
3,725,970	+				-0.2
3,725,970	+				+0.3
3,725,970	+				-0.3
3,725,971	-				-1.5
3,725,971	-				-0.2
3,725,971	-				-0.9
3,726,025	-				-0.3
3,726,025	-				-0.4
3,726,028	-				-1.7
3,726,028	-				+0.1
3,726,193	+		Echvi_3117	0.16	-0.7
3,726,193	+				-0.1
3,726,193	+		Echvi_3117	0.16	-0.2
3,726,194	-		Echvi_3117	0.16	-0.1
3,726,194	-		Echvi_3117	0.16	+1.0
3,726,217	+		Echvi_3117	0.18	-1.7
3,726,217	+		Echvi_3117	0.18	-1.1
3,726,254	+		Echvi_3117	0.21	+0.2
3,726,254	+		Echvi_3117	0.21	-0.1
3,726,255	-		Echvi_3117	0.21	+0.0
3,726,255	-		Echvi_3117	0.21	-0.1
3,726,255	-		Echvi_3117	0.21	-1.1
3,726,255	-		Echvi_3117	0.21	+0.3
3,726,275	+		Echvi_3117	0.22	-0.9
3,726,298	-		Echvi_3117	0.24	+0.1
3,726,369	+		Echvi_3117	0.29	-0.4
3,726,372	-		Echvi_3117	0.30	-0.1
3,726,372	-		Echvi_3117	0.30	-0.3
3,726,432	+		Echvi_3117	0.34	+0.3
3,726,493	-		Echvi_3117	0.39	-1.7
3,726,493	-		Echvi_3117	0.39	-1.7
3,726,532	+		Echvi_3117	0.42	-0.8
3,726,564	+		Echvi_3117	0.44	-0.3
3,726,565	-		Echvi_3117	0.44	+0.4
3,726,585	+		Echvi_3117	0.46	-1.1
3,726,609	+		Echvi_3117	0.47	+1.5
3,726,635	+		Echvi_3117	0.49	-0.8
3,726,635	+		Echvi_3117	0.49	-0.1
3,726,635	+		Echvi_3117	0.49	-0.8
3,726,645	-		Echvi_3117	0.50	+0.0
3,726,698	-		Echvi_3117	0.54	-0.4
3,726,698	-		Echvi_3117	0.54	-0.4
3,726,766	+		Echvi_3117	0.59	-2.4
3,726,767	-		Echvi_3117	0.59	+0.6
3,726,767	-		Echvi_3117	0.59	-1.3
3,726,867	+		Echvi_3117	0.67	+0.2
3,726,868	-		Echvi_3117	0.67	-0.5
3,726,871	+		Echvi_3117	0.67	-1.2
3,726,902	+		Echvi_3117	0.69	-2.7
3,726,903	-		Echvi_3117	0.69	+1.2
3,726,946	+		Echvi_3117	0.73	-1.5
3,726,946	+		Echvi_3117	0.73	-0.1
3,726,947	-		Echvi_3117	0.73	-0.3
3,727,042	-		Echvi_3117	0.80	+0.3
3,727,042	-		Echvi_3117	0.80	-0.2
3,727,105	+		Echvi_3117	0.84	+0.2
3,727,106	-		Echvi_3117	0.85	+0.4
3,727,106	-		Echvi_3117	0.85	+0.1
3,727,106	-		Echvi_3117	0.85	-0.2
3,727,108	-		Echvi_3117	0.85	-1.1
3,727,134	-		Echvi_3117	0.87	-0.1
3,727,134	-		Echvi_3117	0.87	+0.4
3,727,134	-		Echvi_3117	0.87	+0.3
3,727,134	-		Echvi_3117	0.87	+0.7
3,727,143	+		Echvi_3117	0.87	+0.4
3,727,160	+		Echvi_3117	0.89	-2.3
3,727,301	+				+0.0
3,727,302	-				-0.1
3,727,326	+				-0.3
3,727,413	-				-0.2
3,727,416	+				+0.3
3,727,417	-				+0.9
3,727,417	-				-0.3
3,727,570	+				-0.3
3,727,570	+				-1.1
3,727,683	+		Echvi_3118	0.18	-0.8
3,727,688	+		Echvi_3118	0.18	-0.3
3,727,689	-		Echvi_3118	0.18	+1.5
3,727,694	+		Echvi_3118	0.19	+0.3
3,727,694	+		Echvi_3118	0.19	+0.6
3,727,695	-		Echvi_3118	0.19	-0.0
3,727,750	-		Echvi_3118	0.23	+0.1
3,727,750	-		Echvi_3118	0.23	+0.4
3,727,836	+		Echvi_3118	0.29	+1.5
3,727,837	-		Echvi_3118	0.29	+0.8
3,727,860	-		Echvi_3118	0.31	+0.4
3,727,879	-		Echvi_3118	0.32	+0.0
3,727,886	+		Echvi_3118	0.33	+0.3
3,727,982	+		Echvi_3118	0.40	+0.3
3,727,983	-		Echvi_3118	0.40	+1.2
3,728,109	-		Echvi_3118	0.50	-0.2
3,728,133	+		Echvi_3118	0.51	-0.5
3,728,148	-		Echvi_3118	0.52	+0.0