Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3020

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,607,695	-		Echvi_3019	0.15	+1.3
3,607,836	+		Echvi_3019	0.27	+0.3
3,607,836	+		Echvi_3019	0.27	-0.5
3,607,837	-		Echvi_3019	0.27	-0.7
3,607,837	-		Echvi_3019	0.27	+0.3
3,607,837	-		Echvi_3019	0.27	+0.5
3,607,857	-		Echvi_3019	0.29	-0.3
3,607,892	-		Echvi_3019	0.32	-1.1
3,607,945	-		Echvi_3019	0.37	+0.2
3,607,945	-		Echvi_3019	0.37	+0.0
3,608,060	+		Echvi_3019	0.47	-0.5
3,608,060	+		Echvi_3019	0.47	-0.9
3,608,061	-		Echvi_3019	0.47	-2.0
3,608,061	-		Echvi_3019	0.47	+0.3
3,608,069	+		Echvi_3019	0.47	-0.8
3,608,069	+		Echvi_3019	0.47	+0.4
3,608,069	+		Echvi_3019	0.47	+0.3
3,608,105	+		Echvi_3019	0.51	-0.6
3,608,105	+		Echvi_3019	0.51	+0.5
3,608,105	+		Echvi_3019	0.51	-0.4
3,608,105	+		Echvi_3019	0.51	+0.4
3,608,145	+		Echvi_3019	0.54	-0.3
3,608,145	+		Echvi_3019	0.54	-1.0
3,608,198	-		Echvi_3019	0.59	-0.1
3,608,212	+		Echvi_3019	0.60	-0.2
3,608,215	-		Echvi_3019	0.60	-0.8
3,608,239	+		Echvi_3019	0.62	-0.6
3,608,240	-		Echvi_3019	0.62	-2.1
3,608,272	+		Echvi_3019	0.65	+0.6
3,608,307	+		Echvi_3019	0.68	-0.3
3,608,316	+		Echvi_3019	0.69	+0.0
3,608,316	+		Echvi_3019	0.69	-0.9
3,608,316	+		Echvi_3019	0.69	+0.3
3,608,405	+		Echvi_3019	0.76	-0.6
3,608,467	+		Echvi_3019	0.82	-0.5
3,608,484	-		Echvi_3019	0.83	-0.2
3,608,484	-		Echvi_3019	0.83	-0.3
3,608,484	-		Echvi_3019	0.83	-0.8
3,608,503	+		Echvi_3019	0.85	-0.8
3,608,504	-		Echvi_3019	0.85	-1.7
3,608,504	-		Echvi_3019	0.85	-0.1
3,608,619	-				-0.8
3,608,619	-				-1.5
3,608,622	-				+0.2
3,608,624	-				-0.5
3,608,624	-				-1.0
3,608,624	-				-1.7
3,608,624	-				-2.3
3,608,624	-				-0.8
3,608,669	-				+0.3
3,608,723	+		Echvi_3020	0.17	-0.3
3,608,776	-		Echvi_3020	0.50	-0.2
3,608,781	+		Echvi_3020	0.53	+0.3
3,608,781	+		Echvi_3020	0.53	-1.5
3,608,781	+		Echvi_3020	0.53	-0.5
3,608,781	+		Echvi_3020	0.53	-0.3
3,608,781	+		Echvi_3020	0.53	-2.5
3,608,781	+		Echvi_3020	0.53	-0.0
3,608,781	+		Echvi_3020	0.53	-2.3
3,608,781	+		Echvi_3020	0.53	-1.6
3,608,848	+				-1.1
3,608,863	+				-0.1
3,608,864	-				+0.2
3,608,870	-				+1.1
3,608,877	+				-1.2
3,608,877	+				-0.7
3,608,878	-				-0.3
3,608,878	-				+0.5
3,608,907	+				-0.3
3,608,913	+				-1.0
3,608,914	-				-0.3
3,608,916	-				-0.9
3,608,928	+				-0.4
3,608,928	+				+1.3
3,608,929	-				-1.0
3,608,929	-				-0.5
3,608,929	-				-0.1
3,608,929	-				-1.7
3,608,929	-				-0.7
3,608,997	+		Echvi_3021	0.19	+0.5
3,608,998	-		Echvi_3021	0.19	+0.5
3,609,011	-		Echvi_3021	0.22	-0.3
3,609,017	+		Echvi_3021	0.23	-0.3
3,609,017	+		Echvi_3021	0.23	-0.5
3,609,017	+		Echvi_3021	0.23	+0.1
3,609,018	-		Echvi_3021	0.24	-0.0
3,609,022	-		Echvi_3021	0.25	+0.5
3,609,037	+		Echvi_3021	0.28	-0.3
3,609,038	-		Echvi_3021	0.28	+1.0
3,609,044	-		Echvi_3021	0.29	-0.5
3,609,045	+		Echvi_3021	0.29	-0.2
3,609,045	+		Echvi_3021	0.29	-0.3
3,609,046	-		Echvi_3021	0.30	-0.8
3,609,046	-		Echvi_3021	0.30	+0.5
3,609,059	+		Echvi_3021	0.32	+2.5
3,609,133	+		Echvi_3021	0.48	-0.1
3,609,134	-		Echvi_3021	0.49	-0.2
3,609,137	-		Echvi_3021	0.49	+0.5
3,609,167	-		Echvi_3021	0.56	+0.8
3,609,198	+		Echvi_3021	0.62	-0.2
3,609,213	-		Echvi_3021	0.66	-0.1
3,609,213	-		Echvi_3021	0.66	+0.5
3,609,236	+		Echvi_3021	0.71	+1.2
3,609,288	+		Echvi_3021	0.82	+0.2
3,609,289	-		Echvi_3021	0.82	+0.0
3,609,322	+		Echvi_3021	0.89	+0.4
3,609,322	+		Echvi_3021	0.89	-1.2
3,609,323	-		Echvi_3021	0.89	+0.1
3,609,323	-		Echvi_3021	0.89	-0.7
3,609,323	-		Echvi_3021	0.89	+1.2
3,609,323	-		Echvi_3021	0.89	-0.1
3,609,325	-		Echvi_3021	0.90	+0.7
3,609,331	-				+0.1
3,609,335	+				-0.9
3,609,351	-				-0.6
3,609,351	-				+0.6
3,609,378	-				-0.8
3,609,378	-				+0.5
3,609,409	+				-0.5
3,609,410	-				+0.7
3,609,410	-				-0.0
3,609,432	+				-0.2
3,609,432	+				-2.0
3,609,432	+				+0.6
3,609,432	+				-0.2
3,609,432	+				-0.1
3,609,432	+				-0.1
3,609,432	+				+0.5
3,609,433	-				+1.1
3,609,433	-				-0.3
3,609,433	-				-2.2
3,609,452	+				-0.9
3,609,452	+				-0.2
3,609,453	-				+0.9
3,609,514	+		Echvi_3022	0.11	+2.0
3,609,515	-		Echvi_3022	0.11	-0.2
3,609,557	+		Echvi_3022	0.18	+1.7
3,609,557	+		Echvi_3022	0.18	-1.4
3,609,558	-		Echvi_3022	0.19	-0.1
3,609,558	-		Echvi_3022	0.19	-1.4
3,609,558	-		Echvi_3022	0.19	+0.3
3,609,560	+		Echvi_3022	0.19	-1.6
3,609,568	+		Echvi_3022	0.20	+1.5
3,609,609	-		Echvi_3022	0.27	-0.5
3,609,609	-		Echvi_3022	0.27	+0.2
3,609,613	-		Echvi_3022	0.28	-0.7
3,609,613	-				+2.1
3,609,657	+		Echvi_3022	0.35	+0.2
3,609,657	+		Echvi_3022	0.35	+1.2
3,609,663	+		Echvi_3022	0.36	+0.9
3,609,663	+		Echvi_3022	0.36	-0.2
3,609,664	-		Echvi_3022	0.36	-0.1
3,609,664	-				+1.5
3,609,688	+		Echvi_3022	0.40	-0.3
3,609,701	+		Echvi_3022	0.42	+0.7
3,609,701	+		Echvi_3022	0.42	-0.0
3,609,772	+		Echvi_3022	0.54	-0.8
3,609,791	+		Echvi_3022	0.57	-0.0
3,609,791	+		Echvi_3022	0.57	-0.2
3,609,792	-		Echvi_3022	0.57	-1.7
3,609,812	+		Echvi_3022	0.61	+0.8
3,609,812	+		Echvi_3022	0.61	-0.3
3,609,812	+		Echvi_3022	0.61	+0.3
3,609,812	+		Echvi_3022	0.61	-0.3
3,609,813	-		Echvi_3022	0.61	-1.0
3,609,848	+		Echvi_3022	0.67	+1.3
3,609,854	+		Echvi_3022	0.68	-0.1
3,609,854	+		Echvi_3022	0.68	-0.1