Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3004

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,588,505	+		Echvi_3003	0.70	+1.9
3,588,507	+		Echvi_3003	0.72	+0.0
3,588,622	-				-0.5
3,588,710	-				-1.2
3,588,743	+				+0.3
3,588,743	+				-0.6
3,588,744	-				-1.0
3,588,753	-				-0.2
3,588,774	+				-0.4
3,588,811	+				-1.5
3,588,885	-				-0.1
3,588,988	-				-1.5
3,589,014	+				-1.1
3,589,084	-				+0.3
3,589,084	-				+0.2
3,589,088	+				+1.9
3,589,138	-				+0.3
3,589,138	-				-0.4
3,589,197	+				+0.8
3,589,197	+				-0.1
3,589,198	-				+0.5
3,589,198	-				+0.7
3,589,198	-				+0.3
3,589,228	+				+0.7
3,589,250	+				+1.5
3,589,250	+				-0.1
3,589,251	-				+0.4
3,589,251	-				+0.5
3,589,275	+				-1.2
3,589,276	-				+0.5
3,589,276	-				+2.5
3,589,285	+				-1.1
3,589,285	+				+0.2
3,589,285	+				+1.2
3,589,286	-				-1.1
3,589,340	-				+0.1
3,589,345	+				+0.4
3,589,346	-				-1.6
3,589,346	-				+0.2
3,589,447	-		Echvi_3004	0.15	-0.7
3,589,449	+		Echvi_3004	0.15	-0.5
3,589,498	+		Echvi_3004	0.21	-0.6
3,589,498	+		Echvi_3004	0.21	+2.2
3,589,717	+		Echvi_3004	0.44	-0.2
3,589,789	+		Echvi_3004	0.52	+1.7
3,589,789	+		Echvi_3004	0.52	+0.5
3,589,789	+		Echvi_3004	0.52	+0.1
3,589,789	+		Echvi_3004	0.52	+0.5
3,589,790	-		Echvi_3004	0.52	+0.1
3,589,792	-		Echvi_3004	0.53	+0.2
3,589,792	-		Echvi_3004	0.53	+0.1
3,589,811	-		Echvi_3004	0.55	+0.6
3,589,843	+		Echvi_3004	0.58	-0.9
3,589,862	-		Echvi_3004	0.60	+0.7
3,589,909	+		Echvi_3004	0.65	+0.6
3,589,981	-		Echvi_3004	0.73	+0.6
3,590,027	-				-0.1
3,590,047	+		Echvi_3004	0.81	+0.9
3,590,049	+		Echvi_3004	0.81	+0.3
3,590,050	-		Echvi_3004	0.81	+0.6
3,590,085	-		Echvi_3004	0.85	+0.5
3,590,085	-		Echvi_3004	0.85	-0.4
3,590,225	-				+0.1
3,590,228	+				-0.3
3,590,228	+				-1.2
3,590,229	-				+0.6
3,590,229	-				-0.1
3,590,229	-				-0.3
3,590,229	-				-0.6
3,590,229	-				-1.9
3,590,229	-				+1.2
3,590,229	-				-0.9
3,590,231	-				+0.1
3,590,246	+				+1.5
3,590,249	-				+0.5
3,590,280	+				+0.5
3,590,280	+				-0.1
3,590,280	+				+0.5
3,590,311	-				-0.5
3,590,330	+				+0.0
3,590,394	-				-0.7
3,590,541	+		Echvi_3005	0.13	-0.9
3,590,541	+		Echvi_3005	0.13	-1.2
3,590,634	-		Echvi_3005	0.19	-1.0
3,590,751	+		Echvi_3005	0.27	+0.2
3,590,785	+		Echvi_3005	0.29	-0.8
3,590,785	+		Echvi_3005	0.29	+0.8
3,590,786	-		Echvi_3005	0.29	+1.2
3,590,786	-		Echvi_3005	0.29	-0.3
3,590,790	+		Echvi_3005	0.29	+0.7
3,590,791	-		Echvi_3005	0.29	+0.0
3,590,835	+		Echvi_3005	0.32	+0.4
3,590,836	-		Echvi_3005	0.32	-1.2
3,590,847	-		Echvi_3005	0.33	-0.0
3,590,947	-		Echvi_3005	0.40	+0.7
3,591,004	-		Echvi_3005	0.43	+0.6
3,591,004	-		Echvi_3005	0.43	+0.7
3,591,027	+		Echvi_3005	0.45	-0.4
3,591,030	-		Echvi_3005	0.45	+0.6
3,591,195	-		Echvi_3005	0.56	+0.1