Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2921

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,496,090	-		Echvi_2920	0.45	-0.2
3,496,170	+		Echvi_2920	0.52	-0.5
3,496,207	+		Echvi_2920	0.55	-1.3
3,496,208	-		Echvi_2920	0.55	+0.1
3,496,263	+		Echvi_2920	0.60	-2.6
3,496,263	+		Echvi_2920	0.60	-2.2
3,496,268	+		Echvi_2920	0.60	-0.1
3,496,268	+		Echvi_2920	0.60	-0.8
3,496,268	+		Echvi_2920	0.60	-0.2
3,496,269	-		Echvi_2920	0.61	-0.7
3,496,269	-		Echvi_2920	0.61	-0.3
3,496,271	+		Echvi_2920	0.61	+0.2
3,496,271	+		Echvi_2920	0.61	-1.5
3,496,272	-		Echvi_2920	0.61	-0.4
3,496,272	-		Echvi_2920	0.61	+0.6
3,496,337	+		Echvi_2920	0.67	-0.7
3,496,400	+		Echvi_2920	0.72	-0.3
3,496,400	+		Echvi_2920	0.72	+0.6
3,496,401	-		Echvi_2920	0.72	-0.5
3,496,429	+		Echvi_2920	0.75	-2.1
3,496,430	-		Echvi_2920	0.75	-1.4
3,496,432	+		Echvi_2920	0.75	-0.6
3,496,432	+		Echvi_2920	0.75	+0.1
3,496,433	-		Echvi_2920	0.75	-0.0
3,496,433	-		Echvi_2920	0.75	-1.9
3,496,447	+		Echvi_2920	0.76	-0.1
3,496,448	-		Echvi_2920	0.76	+0.0
3,496,448	-		Echvi_2920	0.76	+0.3
3,496,498	+		Echvi_2920	0.81	-0.9
3,496,498	+		Echvi_2920	0.81	-0.1
3,496,499	-		Echvi_2920	0.81	-0.2
3,496,542	-		Echvi_2920	0.85	-0.4
3,496,550	-		Echvi_2920	0.85	-0.1
3,496,618	-				+0.6
3,496,752	+				-0.3
3,496,752	+				-0.2
3,496,753	-				+0.1
3,496,753	-				+0.5
3,496,753	-				+0.4
3,496,802	-				+0.6
3,496,806	+				-0.4
3,496,807	-				-0.7
3,496,807	-				+1.1
3,496,822	-				+0.3
3,496,828	-				-0.1
3,496,867	-				+0.3
3,496,884	+				+0.1
3,496,884	+				-2.4
3,496,905	-				-0.8
3,496,905	-				+0.1
3,497,013	+				-0.4
3,497,013	+				+0.9
3,497,037	+				-0.2
3,497,058	+				+1.3
3,497,058	+				-0.3
3,497,069	-				-0.4
3,497,069	-				-0.4
3,497,347	-		Echvi_2921	0.42	+0.2
3,497,347	-		Echvi_2921	0.42	-0.4
3,497,350	+		Echvi_2921	0.42	-0.8
3,497,351	-		Echvi_2921	0.42	-0.3
3,497,465	-		Echvi_2921	0.58	+1.5
3,497,497	+		Echvi_2921	0.62	+0.0
3,497,549	-		Echvi_2921	0.69	+0.8
3,497,552	+		Echvi_2921	0.69	-0.4
3,497,553	-		Echvi_2921	0.69	-0.9
3,497,584	+		Echvi_2921	0.73	+0.2
3,497,612	+		Echvi_2921	0.77	+0.1
3,497,613	-		Echvi_2921	0.77	-0.5
3,497,630	-		Echvi_2921	0.79	-0.4
3,497,638	-		Echvi_2921	0.80	-0.4
3,497,641	-		Echvi_2921	0.81	+0.2
3,497,641	-		Echvi_2921	0.81	-1.3
3,497,671	+		Echvi_2921	0.85	-2.1
3,497,679	-		Echvi_2921	0.86	-1.9
3,497,679	-		Echvi_2921	0.86	-1.1
3,497,680	+		Echvi_2921	0.86	-0.7
3,497,681	-		Echvi_2921	0.86	+0.5
3,497,692	+		Echvi_2921	0.88	-0.1
3,497,693	-		Echvi_2921	0.88	-0.2
3,497,693	-		Echvi_2921	0.88	+0.0
3,497,693	-		Echvi_2921	0.88	+0.4
3,497,718	+				-0.7
3,497,744	-				-1.0
3,497,764	+				+0.3
3,497,765	-				-0.7
3,497,784	-				+0.3
3,497,831	+				-0.3
3,497,838	+				-0.2
3,497,839	-				+0.0
3,497,852	-				-1.4
3,497,882	+				+1.5
3,497,883	-				-0.1
3,497,883	-				+0.6
3,497,887	+				+0.1
3,497,888	-				+0.5
3,497,888	-				-0.7
3,498,097	-		Echvi_2922	0.16	+0.7
3,498,112	-		Echvi_2922	0.17	-1.3
3,498,172	+		Echvi_2922	0.21	-0.4
3,498,173	-		Echvi_2922	0.21	-0.2
3,498,180	-		Echvi_2922	0.22	+0.1
3,498,180	-		Echvi_2922	0.22	+1.2
3,498,180	-		Echvi_2922	0.22	-0.1
3,498,180	-		Echvi_2922	0.22	-0.3
3,498,226	-		Echvi_2922	0.25	-0.8
3,498,296	+		Echvi_2922	0.30	-1.7
3,498,296	+		Echvi_2922	0.30	-0.5
3,498,296	+		Echvi_2922	0.30	-0.3
3,498,297	-		Echvi_2922	0.31	+1.5
3,498,297	-		Echvi_2922	0.31	-1.7
3,498,297	-		Echvi_2922	0.31	-0.5
3,498,297	-		Echvi_2922	0.31	-0.0
3,498,297	-		Echvi_2922	0.31	-0.1
3,498,300	+		Echvi_2922	0.31	-0.8
3,498,301	-		Echvi_2922	0.31	+0.5
3,498,381	+		Echvi_2922	0.37	-1.8
3,498,382	-		Echvi_2922	0.37	-0.7
3,498,410	+		Echvi_2922	0.39	-1.0
3,498,432	+		Echvi_2922	0.41	-0.1
3,498,543	-		Echvi_2922	0.49	+0.7
3,498,544	+		Echvi_2922	0.49	-1.7
3,498,544	+		Echvi_2922	0.49	+2.8
3,498,545	-		Echvi_2922	0.49	-0.8
3,498,623	+		Echvi_2922	0.55	-0.8
3,498,677	+		Echvi_2922	0.59	-0.2
3,498,682	+		Echvi_2922	0.60	+0.2
3,498,682	+		Echvi_2922	0.60	-1.8
3,498,683	-		Echvi_2922	0.60	-0.6
3,498,779	+		Echvi_2922	0.67	+0.6
3,498,785	+		Echvi_2922	0.67	+0.7