Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2705

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,217,765	+		Echvi_2703	0.38	-1.7
3,217,766	-		Echvi_2703	0.39	+1.0
3,217,800	+		Echvi_2703	0.47	+1.3
3,217,800	+		Echvi_2703	0.47	-1.3
3,217,800	+		Echvi_2703	0.47	-0.7
3,217,801	-		Echvi_2703	0.48	+0.1
3,217,856	+		Echvi_2703	0.62	-0.7
3,217,857	-		Echvi_2703	0.62	+0.8
3,217,857	-		Echvi_2703	0.62	+0.5
3,217,914	+		Echvi_2703	0.77	+0.5
3,217,991	-				+0.4
3,218,040	-				+0.4
3,218,047	-				-2.0
3,218,082	+				+0.4
3,218,085	+				-0.3
3,218,112	+				-0.1
3,218,112	+				+0.1
3,218,112	+				+2.0
3,218,116	+				-1.0
3,218,116	+				+0.3
3,218,121	+				-0.0
3,218,121	+				-0.1
3,218,124	+				+2.9
3,218,125	-				+0.3
3,218,126	+				-0.1
3,218,126	+				+0.3
3,218,126	+				-0.7
3,218,126	+				-0.2
3,218,127	-				+0.3
3,218,128	+				+0.8
3,218,159	+		Echvi_2704	0.14	+0.0
3,218,159	+		Echvi_2704	0.14	+0.8
3,218,215	-		Echvi_2704	0.22	+0.0
3,218,215	-		Echvi_2704	0.22	+0.5
3,218,253	+		Echvi_2704	0.27	+0.3
3,218,254	-		Echvi_2704	0.27	-1.3
3,218,254	-		Echvi_2704	0.27	-1.2
3,218,256	+		Echvi_2704	0.28	+1.6
3,218,256	+		Echvi_2704	0.28	+1.0
3,218,257	-		Echvi_2704	0.28	+0.5
3,218,298	+		Echvi_2704	0.34	-1.7
3,218,298	+		Echvi_2704	0.34	-0.2
3,218,298	+		Echvi_2704	0.34	-2.9
3,218,298	+		Echvi_2704	0.34	+0.2
3,218,299	-		Echvi_2704	0.34	+0.6
3,218,299	-		Echvi_2704	0.34	+1.6
3,218,299	-		Echvi_2704	0.34	-1.4
3,218,330	-		Echvi_2704	0.38	-0.7
3,218,330	-		Echvi_2704	0.38	-0.2
3,218,330	-		Echvi_2704	0.38	+0.5
3,218,330	-		Echvi_2704	0.38	-1.4
3,218,330	-		Echvi_2704	0.38	-0.3
3,218,330	-		Echvi_2704	0.38	+0.3
3,218,365	+		Echvi_2704	0.44	-0.9
3,218,368	-		Echvi_2704	0.44	+0.1
3,218,368	-		Echvi_2704	0.44	+1.3
3,218,414	-		Echvi_2704	0.51	+0.2
3,218,434	-		Echvi_2704	0.54	+0.1
3,218,500	-		Echvi_2704	0.63	-0.6
3,218,611	+		Echvi_2704	0.79	+1.3
3,218,612	-		Echvi_2704	0.79	+0.2
3,218,612	-		Echvi_2704	0.79	+0.1
3,218,771	+				+1.2
3,218,772	-				+0.2
3,218,878	-		Echvi_2705	0.10	+0.0
3,218,878	-		Echvi_2705	0.10	-1.6
3,218,895	+		Echvi_2705	0.11	+1.0
3,218,896	-		Echvi_2705	0.11	+0.4
3,218,896	-		Echvi_2705	0.11	-1.1
3,218,939	+		Echvi_2705	0.15	-1.7
3,218,940	-		Echvi_2705	0.15	-0.9
3,218,967	+		Echvi_2705	0.17	+0.3
3,218,967	+		Echvi_2705	0.17	-0.4
3,218,969	+		Echvi_2705	0.17	-0.9
3,218,969	+		Echvi_2705	0.17	-0.9
3,219,067	+		Echvi_2705	0.25	-1.0
3,219,116	-		Echvi_2705	0.29	+0.3
3,219,128	+		Echvi_2705	0.29	-0.4
3,219,206	+		Echvi_2705	0.36	+0.1
3,219,206	+		Echvi_2705	0.36	-0.7
3,219,207	-		Echvi_2705	0.36	-0.4
3,219,271	+		Echvi_2705	0.41	-0.7
3,219,272	-		Echvi_2705	0.41	-0.8
3,219,272	-		Echvi_2705	0.41	+0.6
3,219,272	-		Echvi_2705	0.41	-0.3
3,219,345	-		Echvi_2705	0.46	-0.4
3,219,569	+		Echvi_2705	0.64	-0.4
3,219,570	-		Echvi_2705	0.64	-0.9
3,219,674	+		Echvi_2705	0.72	+0.3
3,219,731	-		Echvi_2705	0.76	-0.4
3,219,836	+		Echvi_2705	0.84	-1.4
3,219,889	+		Echvi_2705	0.89	-1.4
3,219,890	-		Echvi_2705	0.89	-0.0
3,219,890	-		Echvi_2705	0.89	-0.5
3,219,932	+				-1.7
3,219,932	+				+0.1
3,219,933	-				-2.4
3,219,933	-				+0.7
3,219,945	-				-0.4
3,219,945	-				-0.0
3,219,945	-				-0.2
3,220,033	+				+1.1
3,220,033	+				-2.0
3,220,033	+				-0.8
3,220,033	+				-0.2
3,220,033	+				-1.5
3,220,042	-				-1.7
3,220,066	-				+1.0
3,220,066	-				+1.3
3,220,131	-		Echvi_2706	0.21	+3.0
3,220,144	-		Echvi_2706	0.24	-0.4
3,220,158	-		Echvi_2706	0.28	-0.7
3,220,203	+		Echvi_2706	0.38	-0.7
3,220,204	-		Echvi_2706	0.39	-1.4
3,220,223	-		Echvi_2706	0.43	-1.5
3,220,352	-		Echvi_2706	0.74	-0.6
3,220,352	-		Echvi_2706	0.74	+0.6
3,220,371	-		Echvi_2706	0.79	-0.5
3,220,374	+		Echvi_2706	0.79	-0.5
3,220,412	-		Echvi_2706	0.88	-1.0
3,220,427	+				+0.3
3,220,428	-				-0.2
3,220,428	-				+0.4
3,220,428	-				-0.1
3,220,457	+				-1.6
3,220,509	+				-0.4
3,220,510	-				+1.1
3,220,510	-				+0.3
3,220,511	+				-1.1
3,220,511	+				-0.7
3,220,512	-				-0.4
3,220,512	-				-0.2
3,220,512	-				-0.7
3,220,549	-				+0.6
3,220,558	+				+0.2
3,220,563	+				-0.1
3,220,604	+				-0.4
3,220,605	-				+1.1
3,220,605	-				-0.9
3,220,610	+				-0.9
3,220,611	-				-0.4
3,220,615	+				+1.6
3,220,615	+				-0.7
3,220,615	+				-0.4
3,220,615	+				+1.1
3,220,615	+				-0.1
3,220,616	-				-1.4
3,220,616	-				-0.3
3,220,616	-				-0.2
3,220,616	-				-2.2
3,220,616	-				+0.3
3,220,619	+				-0.8
3,220,619	+				-0.3
3,220,619	+				-1.6
3,220,619	+				-0.4
3,220,694	+				-1.3
3,220,695	-				-1.9
3,220,695	-				-1.4
3,220,756	-				-0.1
3,220,756	-				-0.7
3,220,827	+		Echvi_2707	0.14	+0.3
3,220,828	-		Echvi_2707	0.14	-1.8
3,220,828	-		Echvi_2707	0.14	+0.7
3,220,828	-		Echvi_2707	0.14	+1.2
3,220,828	-		Echvi_2707	0.14	-2.1
3,220,828	-		Echvi_2707	0.14	-0.2
3,220,848	-		Echvi_2707	0.15	-1.0
3,220,869	-		Echvi_2707	0.17	+0.4
3,220,869	-		Echvi_2707	0.17	+1.3
3,220,869	-		Echvi_2707	0.17	-0.1
3,220,881	+		Echvi_2707	0.18	-0.7
3,220,881	+		Echvi_2707	0.18	+0.2
3,220,881	+		Echvi_2707	0.18	+0.1
3,220,882	-		Echvi_2707	0.18	-1.4
3,220,971	+		Echvi_2707	0.24	-0.0
3,220,972	-		Echvi_2707	0.24	+0.8