Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2640

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,129,349	+		Echvi_2639	0.13	-1.1
3,129,349	+		Echvi_2639	0.13	-0.2
3,129,349	+		Echvi_2639	0.13	+0.0
3,129,355	-		Echvi_2639	0.14	+0.7
3,129,401	+		Echvi_2639	0.18	-0.4
3,129,401	+		Echvi_2639	0.18	+1.5
3,129,402	-		Echvi_2639	0.18	-0.5
3,129,408	+		Echvi_2639	0.19	-2.2
3,129,477	-		Echvi_2639	0.25	-0.1
3,129,477	-		Echvi_2639	0.25	-3.0
3,129,477	-		Echvi_2639	0.25	+0.8
3,129,478	+		Echvi_2639	0.25	-0.2
3,129,479	-		Echvi_2639	0.25	-0.3
3,129,479	-		Echvi_2639	0.25	+0.2
3,129,482	+		Echvi_2639	0.25	+0.5
3,129,483	-		Echvi_2639	0.25	+1.5
3,129,483	-		Echvi_2639	0.25	-0.2
3,129,494	-		Echvi_2639	0.26	+0.2
3,129,494	-		Echvi_2639	0.26	+0.4
3,129,494	-		Echvi_2639	0.26	-0.0
3,129,494	-		Echvi_2639	0.26	-0.8
3,129,494	-		Echvi_2639	0.26	-0.7
3,129,495	+		Echvi_2639	0.27	-0.7
3,129,517	+		Echvi_2639	0.29	+1.4
3,129,518	-		Echvi_2639	0.29	-0.1
3,129,518	-		Echvi_2639	0.29	+0.1
3,129,518	-		Echvi_2639	0.29	-0.2
3,129,532	+		Echvi_2639	0.30	+0.0
3,129,533	-		Echvi_2639	0.30	+0.5
3,129,564	+		Echvi_2639	0.33	-0.6
3,129,565	-		Echvi_2639	0.33	-0.6
3,129,566	+		Echvi_2639	0.33	+1.1
3,129,567	-		Echvi_2639	0.33	+0.1
3,129,575	+		Echvi_2639	0.34	-0.3
3,129,624	+		Echvi_2639	0.38	+0.6
3,129,626	+		Echvi_2639	0.38	+1.0
3,129,626	+		Echvi_2639	0.38	+0.1
3,129,627	-		Echvi_2639	0.38	+0.7
3,129,627	-		Echvi_2639	0.38	+1.6
3,129,702	+		Echvi_2639	0.45	+0.0
3,129,702	+		Echvi_2639	0.45	-0.3
3,129,703	-		Echvi_2639	0.45	+0.3
3,129,731	+		Echvi_2639	0.48	-0.7
3,129,775	+		Echvi_2639	0.52	+0.0
3,129,775	+		Echvi_2639	0.52	-0.6
3,129,775	+		Echvi_2639	0.52	-0.4
3,129,775	+		Echvi_2639	0.52	-2.9
3,129,776	-		Echvi_2639	0.52	+0.2
3,129,776	-		Echvi_2639	0.52	-1.1
3,129,776	-		Echvi_2639	0.52	-1.8
3,129,847	+		Echvi_2639	0.58	+1.5
3,129,907	-		Echvi_2639	0.64	+0.3
3,129,916	-		Echvi_2639	0.65	-0.0
3,130,037	+		Echvi_2639	0.76	+2.0
3,130,069	-		Echvi_2639	0.78	+0.4
3,130,085	+		Echvi_2639	0.80	+0.3
3,130,086	-		Echvi_2639	0.80	-0.1
3,130,086	-		Echvi_2639	0.80	-0.8
3,130,100	+		Echvi_2639	0.81	-0.4
3,130,113	+		Echvi_2639	0.82	+0.3
3,130,204	-				-1.1
3,130,247	+				+0.6
3,130,248	-				-0.0
3,130,248	-				-0.3
3,130,261	-				-0.5
3,130,261	-				-1.0
3,130,261	-				-1.1
3,130,273	-				+0.7
3,130,278	-				-1.2
3,130,284	+				-0.4
3,130,284	+				+1.1
3,130,285	-				-0.0
3,130,304	-				-0.4
3,130,304	-				-0.2
3,130,316	+				-1.5
3,130,344	+				+0.1
3,130,381	+		Echvi_2640	0.13	-0.4
3,130,381	+		Echvi_2640	0.13	-0.1
3,130,495	+		Echvi_2640	0.31	+2.6
3,130,578	+		Echvi_2640	0.44	-1.0
3,130,587	+		Echvi_2640	0.46	-0.9
3,130,587	+		Echvi_2640	0.46	-1.0
3,130,753	-		Echvi_2640	0.72	-1.8
3,130,803	+		Echvi_2640	0.80	-1.3
3,130,804	-		Echvi_2640	0.80	-0.9
3,130,815	+		Echvi_2640	0.82	-1.8
3,130,885	+				-0.4
3,130,885	+				-1.0
3,130,886	-				+1.7
3,130,918	-				-1.8
3,130,960	+				+0.3
3,131,288	-		Echvi_2642	0.18	+0.0
3,131,364	+		Echvi_2642	0.40	+0.1
3,131,364	+		Echvi_2642	0.40	-0.2
3,131,364	+				+1.2
3,131,364	+		Echvi_2642	0.40	+0.3
3,131,365	-		Echvi_2642	0.40	-0.7
3,131,365	-		Echvi_2642	0.40	-0.2
3,131,367	-		Echvi_2642	0.41	-1.0
3,131,367	-		Echvi_2642	0.41	-1.4
3,131,393	+		Echvi_2642	0.49	+0.4
3,131,394	-		Echvi_2642	0.49	+0.2
3,131,397	+		Echvi_2642	0.50	-2.2
3,131,397	+		Echvi_2642	0.50	+0.9
3,131,398	-		Echvi_2642	0.50	-0.2
3,131,398	-		Echvi_2642	0.50	-0.2
3,131,399	+		Echvi_2642	0.50	-1.1
3,131,399	+		Echvi_2642	0.50	-0.7
3,131,399	+		Echvi_2642	0.50	+0.6
3,131,399	+		Echvi_2642	0.50	-0.6
3,131,399	+		Echvi_2642	0.50	-0.5
3,131,399	+		Echvi_2642	0.50	+0.5
3,131,400	-		Echvi_2642	0.51	-0.3
3,131,422	+		Echvi_2642	0.57	+0.6
3,131,423	-		Echvi_2642	0.57	-1.8
3,131,460	+		Echvi_2642	0.68	-0.7
3,131,491	+		Echvi_2642	0.77	-0.5
3,131,491	+		Echvi_2642	0.77	+0.3
3,131,491	+		Echvi_2642	0.77	+0.7
3,131,491	+		Echvi_2642	0.77	-0.1
3,131,492	-		Echvi_2642	0.77	-0.5
3,131,522	-		Echvi_2642	0.86	+1.0
3,131,546	-				+0.3
3,131,574	-				-0.5
3,131,609	+				+0.7
3,131,638	+				-1.0
3,131,639	-				-0.0
3,131,663	+				+0.2
3,131,664	-				+1.4
3,131,718	+				-0.6
3,131,768	-				-1.1
3,131,815	+				+0.3
3,131,815	+				-0.2
3,131,817	+				-1.1
3,131,817	+				+0.4
3,131,821	+				-0.4
3,131,821	+				-0.4
3,131,823	+				-0.2
3,131,829	+				-0.3