Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1960

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,299,421	-		Echvi_1958	0.51	-0.2
2,299,447	+		Echvi_1958	0.54	-0.6
2,299,448	-		Echvi_1958	0.54	+2.8
2,299,487	+		Echvi_1958	0.59	+1.1
2,299,493	-		Echvi_1958	0.60	-0.3
2,299,503	+		Echvi_1958	0.61	-0.1
2,299,504	-		Echvi_1958	0.61	-1.3
2,299,504	-		Echvi_1958	0.61	+0.1
2,299,530	+		Echvi_1958	0.64	+0.8
2,299,531	-		Echvi_1958	0.65	+0.9
2,299,545	+		Echvi_1958	0.66	+1.2
2,299,546	-		Echvi_1958	0.66	+1.3
2,299,546	-		Echvi_1958	0.66	+1.2
2,299,546	-		Echvi_1958	0.66	+0.7
2,299,548	+		Echvi_1958	0.67	+0.2
2,299,548	+		Echvi_1958	0.67	+0.3
2,299,549	-		Echvi_1958	0.67	-0.7
2,299,549	-		Echvi_1958	0.67	-1.5
2,299,549	-		Echvi_1958	0.67	+0.0
2,299,563	+		Echvi_1958	0.69	+0.5
2,299,571	+		Echvi_1958	0.70	-0.8
2,299,571	+		Echvi_1958	0.70	-0.4
2,299,572	-		Echvi_1958	0.70	-0.9
2,299,583	+		Echvi_1958	0.71	+0.1
2,299,641	+		Echvi_1958	0.78	-0.7
2,299,643	+		Echvi_1958	0.79	+0.0
2,299,696	-		Echvi_1958	0.85	+1.8
2,299,696	-		Echvi_1958	0.85	-0.1
2,299,699	+		Echvi_1958	0.86	-1.8
2,299,699	+		Echvi_1958	0.86	-1.2
2,299,700	-		Echvi_1958	0.86	-0.4
2,299,700	-		Echvi_1958	0.86	-0.2
2,299,734	-				-0.5
2,299,762	-				-0.7
2,299,768	-				-0.4
2,299,774	-				+0.1
2,299,774	-				+0.6
2,299,774	-				-0.1
2,299,793	-				-2.6
2,299,805	-				+0.9
2,299,844	+				-0.6
2,299,844	+				-2.1
2,299,864	+				+1.6
2,299,864	+				-0.8
2,299,864	+				+0.3
2,299,864	+				+1.2
2,299,885	+				-0.1
2,299,909	-				-0.4
2,299,909	-				-0.6
2,299,964	-		Echvi_1959	0.12	+0.0
2,299,964	-		Echvi_1959	0.12	+0.3
2,299,982	+		Echvi_1959	0.16	-0.2
2,300,003	+		Echvi_1959	0.20	+0.5
2,300,043	-		Echvi_1959	0.28	+0.2
2,300,043	-		Echvi_1959	0.28	+0.0
2,300,043	-		Echvi_1959	0.28	+0.5
2,300,049	+		Echvi_1959	0.29	-1.4
2,300,049	+		Echvi_1959	0.29	-0.7
2,300,050	-		Echvi_1959	0.29	+0.3
2,300,052	-		Echvi_1959	0.29	-0.3
2,300,118	+		Echvi_1959	0.42	-0.1
2,300,118	+		Echvi_1959	0.42	-0.1
2,300,118	+		Echvi_1959	0.42	+0.1
2,300,122	+		Echvi_1959	0.43	+0.4
2,300,125	+		Echvi_1959	0.44	-0.3
2,300,125	+		Echvi_1959	0.44	-0.5
2,300,156	+		Echvi_1959	0.50	-0.4
2,300,158	+		Echvi_1959	0.50	+0.6
2,300,159	-		Echvi_1959	0.50	+0.6
2,300,175	+		Echvi_1959	0.54	-0.5
2,300,182	-		Echvi_1959	0.55	+2.8
2,300,182	-		Echvi_1959	0.55	+1.3
2,300,258	+		Echvi_1959	0.70	-0.2
2,300,259	-		Echvi_1959	0.70	-1.6
2,300,259	-		Echvi_1959	0.70	-0.2
2,300,299	+		Echvi_1959	0.78	-0.2
2,300,300	-		Echvi_1959	0.78	-0.3
2,300,300	-		Echvi_1959	0.78	-0.3
2,300,300	-		Echvi_1959	0.78	+0.8
2,300,300	-		Echvi_1959	0.78	-2.0
2,300,348	+		Echvi_1959	0.87	+1.8
2,300,349	-		Echvi_1959	0.88	-1.6
2,300,362	-				+0.6
2,300,397	-				+0.2
2,300,425	+				-0.9
2,300,447	+		Echvi_1960	0.11	-0.2
2,300,526	+		Echvi_1960	0.43	+0.0
2,300,542	+		Echvi_1960	0.50	+0.2
2,300,566	+		Echvi_1960	0.60	-0.9
2,300,576	-		Echvi_1960	0.64	-1.1
2,300,582	+				-1.3
2,300,608	-				-0.3
2,300,671	+				-0.4
2,300,684	+				-0.4
2,300,684	+				-0.3
2,300,685	-				-1.0
2,300,710	+				-0.6
2,300,710	+				-1.7
2,300,711	-				-0.8
2,300,719	+				+0.2
2,300,725	-				-1.0
2,300,725	-				+0.4
2,300,725	-				+0.1
2,300,747	-				+1.2
2,300,769	+				-0.4
2,300,769	+				-0.2
2,300,770	-				-0.8
2,300,803	+		Echvi_1961	0.11	-0.4
2,300,827	+		Echvi_1961	0.13	+0.0
2,300,828	-		Echvi_1961	0.13	-1.0
2,300,828	-		Echvi_1961	0.13	+0.3
2,300,839	-		Echvi_1961	0.13	-0.2
2,300,856	+		Echvi_1961	0.14	+0.4
2,300,856	+		Echvi_1961	0.14	+1.8
2,300,860	+		Echvi_1961	0.14	-0.0
2,300,860	+		Echvi_1961	0.14	-0.6
2,300,860	+		Echvi_1961	0.14	+0.5
2,300,861	-		Echvi_1961	0.14	+1.2
2,300,861	-		Echvi_1961	0.14	+0.4
2,300,861	-		Echvi_1961	0.14	+0.0
2,300,861	-		Echvi_1961	0.14	-0.5
2,300,861	-		Echvi_1961	0.14	+0.3
2,300,884	+		Echvi_1961	0.15	-1.6
2,300,891	+		Echvi_1961	0.16	+0.9
2,300,892	-		Echvi_1961	0.16	-1.0
2,300,892	-		Echvi_1961	0.16	-0.1
2,300,892	-		Echvi_1961	0.16	-0.3
2,300,892	-		Echvi_1961	0.16	-0.0
2,300,962	-		Echvi_1961	0.19	+0.0
2,300,962	-		Echvi_1961	0.19	-0.9
2,300,970	+		Echvi_1961	0.20	-0.8
2,300,970	+		Echvi_1961	0.20	-1.2
2,300,971	-		Echvi_1961	0.20	+2.0
2,300,971	-		Echvi_1961	0.20	+1.0
2,300,971	-		Echvi_1961	0.20	+0.0
2,300,971	-		Echvi_1961	0.20	-1.0
2,300,971	-		Echvi_1961	0.20	+0.1
2,300,971	-		Echvi_1961	0.20	+0.9
2,300,971	-		Echvi_1961	0.20	-0.6
2,300,971	-		Echvi_1961	0.20	+1.2
2,300,978	+		Echvi_1961	0.20	+0.4
2,300,979	-		Echvi_1961	0.20	+0.5
2,301,001	-		Echvi_1961	0.21	+0.8
2,301,003	-		Echvi_1961	0.22	+0.3
2,301,012	+		Echvi_1961	0.22	-0.0
2,301,012	+		Echvi_1961	0.22	+0.2
2,301,018	+		Echvi_1961	0.22	+0.0
2,301,019	-		Echvi_1961	0.22	-0.4
2,301,035	-		Echvi_1961	0.23	-0.2
2,301,037	+		Echvi_1961	0.23	+1.3
2,301,037	+		Echvi_1961	0.23	-1.6
2,301,037	+		Echvi_1961	0.23	-0.5
2,301,038	-		Echvi_1961	0.23	+0.6
2,301,038	-		Echvi_1961	0.23	-0.2
2,301,039	+		Echvi_1961	0.23	+0.0
2,301,039	+		Echvi_1961	0.23	+0.8
2,301,040	-		Echvi_1961	0.23	-0.3
2,301,040	-		Echvi_1961	0.23	-0.2
2,301,111	+		Echvi_1961	0.27	+0.2
2,301,128	+		Echvi_1961	0.28	-0.2
2,301,128	+		Echvi_1961	0.28	-0.2
2,301,128	+		Echvi_1961	0.28	-0.6
2,301,128	+		Echvi_1961	0.28	+0.4
2,301,129	-		Echvi_1961	0.28	-0.2
2,301,129	-		Echvi_1961	0.28	-0.9
2,301,130	+		Echvi_1961	0.28	-0.7
2,301,131	-		Echvi_1961	0.28	+0.5
2,301,131	-		Echvi_1961	0.28	-2.1
2,301,167	-		Echvi_1961	0.30	+0.1
2,301,171	-		Echvi_1961	0.30	-0.8
2,301,174	+		Echvi_1961	0.30	+0.1
2,301,177	+		Echvi_1961	0.30	-0.2
2,301,177	+		Echvi_1961	0.30	+0.8
2,301,196	+		Echvi_1961	0.31	+0.4
2,301,196	+		Echvi_1961	0.31	+0.5
2,301,202	+		Echvi_1961	0.32	+0.2
2,301,247	+		Echvi_1961	0.34	-0.3
2,301,247	+		Echvi_1961	0.34	+0.2
2,301,247	+		Echvi_1961	0.34	+0.2
2,301,248	-		Echvi_1961	0.34	-0.8
2,301,280	+		Echvi_1961	0.36	-1.0
2,301,280	+		Echvi_1961	0.36	-0.4
2,301,281	-		Echvi_1961	0.36	-0.3
2,301,283	-		Echvi_1961	0.36	-0.1
2,301,305	-		Echvi_1961	0.37	+0.8
2,301,367	+		Echvi_1961	0.40	+0.9
2,301,368	-		Echvi_1961	0.40	+0.4
2,301,368	-		Echvi_1961	0.40	-0.3
2,301,368	-		Echvi_1961	0.40	+0.8
2,301,368	-		Echvi_1961	0.40	+1.3
2,301,371	+		Echvi_1961	0.40	-0.8
2,301,371	+		Echvi_1961	0.40	-0.2
2,301,371	+		Echvi_1961	0.40	+0.8
2,301,381	+		Echvi_1961	0.41	-0.8
2,301,382	-		Echvi_1961	0.41	-0.0
2,301,391	+		Echvi_1961	0.41	+0.8
2,301,391	+		Echvi_1961	0.41	-2.0
2,301,425	-		Echvi_1961	0.43	-1.2
2,301,425	-		Echvi_1961	0.43	+0.8
2,301,558	-		Echvi_1961	0.50	-0.8
2,301,569	-		Echvi_1961	0.51	-0.2
2,301,569	-		Echvi_1961	0.51	+1.2
2,301,572	+		Echvi_1961	0.51	+0.6
2,301,573	-		Echvi_1961	0.51	+0.0
2,301,574	+		Echvi_1961	0.51	+0.1
2,301,574	+		Echvi_1961	0.51	+0.3
2,301,575	-		Echvi_1961	0.51	+0.1
2,301,575	-		Echvi_1961	0.51	-0.2
2,301,576	+		Echvi_1961	0.51	+0.3
2,301,576	+		Echvi_1961	0.51	-0.4
2,301,576	+		Echvi_1961	0.51	+0.1
2,301,576	+		Echvi_1961	0.51	+0.3
2,301,576	+		Echvi_1961	0.51	-0.4
2,301,579	+		Echvi_1961	0.51	+0.3
2,301,579	+		Echvi_1961	0.51	+0.7
2,301,580	-		Echvi_1961	0.51	+0.5
2,301,654	+		Echvi_1961	0.55	-0.0
2,301,655	-		Echvi_1961	0.55	-0.7
2,301,655	-		Echvi_1961	0.55	+0.1
2,301,656	+		Echvi_1961	0.55	-0.0
2,301,657	-		Echvi_1961	0.55	-2.5