Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1931

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,272,492	+		Echvi_1929	0.62	+0.2
2,272,496	-		Echvi_1929	0.64	-0.8
2,272,504	+		Echvi_1929	0.69	-0.6
2,272,504	+		Echvi_1929	0.69	-0.2
2,272,518	+		Echvi_1929	0.77	+0.8
2,272,556	+				+0.8
2,272,556	+				+0.7
2,272,556	+				+0.5
2,272,560	+				+0.8
2,272,615	+				+1.0
2,272,616	-				-0.4
2,272,616	-				-0.5
2,272,619	-				-0.2
2,272,715	+		Echvi_1930	0.15	+0.5
2,272,990	-		Echvi_1930	0.75	+2.1
2,272,993	-		Echvi_1930	0.76	-0.3
2,272,993	-		Echvi_1930	0.76	-1.7
2,273,049	-		Echvi_1930	0.88	-1.2
2,273,218	-				+1.2
2,273,225	-				+1.4
2,273,270	+				-1.1
2,273,270	+				-0.1
2,273,302	+				-0.1
2,273,325	+				+0.1
2,273,491	+				+0.0
2,273,509	+				+1.3
2,273,564	-		Echvi_1931	0.11	+0.2
2,273,604	+		Echvi_1931	0.15	+0.0
2,273,604	+		Echvi_1931	0.15	-1.1
2,273,626	+		Echvi_1931	0.17	-0.3
2,273,773	+		Echvi_1931	0.31	+0.5
2,273,773	+		Echvi_1931	0.31	-0.0
2,273,774	-		Echvi_1931	0.31	+0.1
2,273,801	-		Echvi_1931	0.34	-0.8
2,273,908	+		Echvi_1931	0.44	-1.2
2,273,909	-		Echvi_1931	0.44	+0.4
2,273,909	-		Echvi_1931	0.44	+0.2
2,274,097	+		Echvi_1931	0.61	-0.1
2,274,138	+		Echvi_1931	0.65	-1.5
2,274,201	-		Echvi_1931	0.71	-2.7
2,274,210	+				+1.8
2,274,366	+		Echvi_1931	0.87	-0.2
2,274,692	+				+0.3
2,274,807	+				-0.6
2,274,969	+				+1.0
2,275,212	+		Echvi_1932	0.16	-0.4
2,275,293	+		Echvi_1932	0.21	-0.2
2,275,293	+		Echvi_1932	0.21	-0.8
2,275,351	-		Echvi_1932	0.24	-0.0
2,275,357	+		Echvi_1932	0.24	-0.2
2,275,384	-		Echvi_1932	0.26	+0.8
2,275,420	-		Echvi_1932	0.28	+0.8
2,275,420	-		Echvi_1932	0.28	-0.1