Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1865

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,185,400	+		Echvi_1864	0.12	-0.6
2,185,400	+		Echvi_1864	0.12	+0.3
2,185,400	+		Echvi_1864	0.12	+0.5
2,185,400	+		Echvi_1864	0.12	-0.2
2,185,475	-		Echvi_1864	0.20	-0.0
2,185,488	-				+1.8
2,185,527	-		Echvi_1864	0.25	-0.0
2,185,606	+		Echvi_1864	0.32	-0.5
2,185,689	-		Echvi_1864	0.40	+0.7
2,185,696	-		Echvi_1864	0.41	+0.6
2,185,696	-		Echvi_1864	0.41	-0.0
2,185,696	-		Echvi_1864	0.41	-1.9
2,185,699	+		Echvi_1864	0.41	+0.8
2,185,699	+		Echvi_1864	0.41	-0.2
2,185,699	+		Echvi_1864	0.41	+1.2
2,185,699	+		Echvi_1864	0.41	+0.8
2,185,699	+		Echvi_1864	0.41	+1.2
2,185,699	+		Echvi_1864	0.41	+0.9
2,185,699	+		Echvi_1864	0.41	+1.8
2,185,699	+		Echvi_1864	0.41	-0.7
2,185,699	+		Echvi_1864	0.41	+1.2
2,185,700	-		Echvi_1864	0.41	-0.0
2,185,700	-		Echvi_1864	0.41	+0.0
2,185,700	-		Echvi_1864	0.41	+0.7
2,185,700	-		Echvi_1864	0.41	-2.3
2,185,700	-		Echvi_1864	0.41	-0.5
2,185,700	-		Echvi_1864	0.41	-0.5
2,185,700	-		Echvi_1864	0.41	-0.3
2,185,700	-		Echvi_1864	0.41	-1.2
2,185,700	-		Echvi_1864	0.41	-0.5
2,185,700	-		Echvi_1864	0.41	-1.0
2,185,700	-		Echvi_1864	0.41	-1.5
2,185,700	-		Echvi_1864	0.41	+0.8
2,185,700	-		Echvi_1864	0.41	-0.8
2,185,700	-		Echvi_1864	0.41	+0.6
2,185,702	-		Echvi_1864	0.42	-0.4
2,185,702	-		Echvi_1864	0.42	-0.5
2,185,710	-		Echvi_1864	0.42	-0.6
2,185,725	-		Echvi_1864	0.44	-0.6
2,185,745	+		Echvi_1864	0.46	-0.0
2,185,921	+		Echvi_1864	0.63	+2.8
2,185,922	-		Echvi_1864	0.63	+0.9
2,185,943	+		Echvi_1864	0.65	+0.6
2,186,029	+		Echvi_1864	0.73	+0.8
2,186,030	-		Echvi_1864	0.73	-0.7
2,186,032	-		Echvi_1864	0.73	-0.4
2,186,032	-		Echvi_1864	0.73	-0.3
2,186,251	+				+0.8
2,186,251	+				+0.7
2,186,251	+				-0.7
2,186,252	-				-0.1
2,186,252	-				+0.2
2,186,254	+				-0.4
2,186,254	+				-0.1
2,186,255	-				+0.3
2,186,255	-				+0.9
2,186,261	+				-0.0
2,186,261	+				-0.9
2,186,362	+				+0.4
2,186,363	-				+0.7
2,186,373	+				+0.0
2,186,373	+				+3.4
2,186,396	-		Echvi_1865	0.16	-0.9
2,186,445	+		Echvi_1865	0.43	-0.0
2,186,509	-		Echvi_1865	0.78	-0.8
2,186,591	-				+1.0
2,186,591	-				-0.5
2,186,592	+				+0.3
2,186,593	-				+0.5
2,186,593	-				+0.4
2,186,653	+				-2.8
2,186,654	-				+1.1
2,186,654	-				-0.7
2,186,662	-				-0.6
2,186,662	-				-0.4
2,186,667	-				-0.1
2,186,729	+				+0.2
2,186,732	+				-0.0
2,186,732	+				+0.3
2,186,736	+				+0.2
2,186,739	-				-0.2
2,186,739	-				+0.1
2,186,751	+				+0.3
2,186,844	+				-0.8
2,186,856	+				-0.9
2,186,856	+				+0.9
2,186,870	+				-0.7
2,186,897	+				-0.4
2,186,944	+				-1.2
2,186,944	+				-0.5
2,186,972	+				-0.5
2,186,973	-				-0.0
2,186,973	-				-0.4
2,187,013	-				-0.2
2,187,061	-				+0.2
2,187,061	-				-0.3
2,187,144	+				-0.8
2,187,144	+				+0.4
2,187,168	-				+0.7
2,187,168	-				-0.7
2,187,168	-				-0.8
2,187,169	+				-0.5
2,187,170	-				+0.6
2,187,170	-				-0.1
2,187,170	-				+0.2
2,187,170	-				-0.2
2,187,170	-				-0.5
2,187,170	-				-1.1
2,187,172	+				-0.0
2,187,172	+				+0.3
2,187,173	-				+1.8
2,187,173	-				-1.1
2,187,173	-				+0.7
2,187,219	-				+0.1
2,187,307	-		Echvi_1866	0.12	-0.1
2,187,361	-		Echvi_1866	0.14	+0.6
2,187,512	-		Echvi_1866	0.19	+0.7
2,187,528	+		Echvi_1866	0.19	+1.3
2,187,528	+		Echvi_1866	0.19	-1.7