Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1804

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,119,989	+				+1.1
2,120,012	+		Echvi_1803	0.14	-0.9
2,120,012	+		Echvi_1803	0.14	+0.2
2,120,012	+		Echvi_1803	0.14	-0.5
2,120,013	-		Echvi_1803	0.14	-0.5
2,120,071	+		Echvi_1803	0.52	-1.5
2,120,077	+		Echvi_1803	0.56	+0.4
2,120,077	+		Echvi_1803	0.56	-0.6
2,120,078	-		Echvi_1803	0.57	-0.1
2,120,078	-		Echvi_1803	0.57	+0.2
2,120,078	-		Echvi_1803	0.57	+1.2
2,120,078	-		Echvi_1803	0.57	-0.3
2,120,103	+		Echvi_1803	0.73	-0.2
2,120,104	-		Echvi_1803	0.74	-0.8
2,120,138	-				-1.1
2,120,138	-				+1.5
2,120,146	+				-0.7
2,120,146	+				+0.3
2,120,146	+				+1.0
2,120,146	+				-1.6
2,120,147	-				+0.9
2,120,205	+				-0.2
2,120,206	-				+0.5
2,120,206	-				-0.6
2,120,270	-				-0.4
2,120,303	-				-1.9
2,120,303	-				+0.1
2,120,331	+				+0.2
2,120,332	-				-0.8
2,120,332	-				+2.8
2,120,332	-				+0.3
2,120,332	-				+0.3
2,120,332	-				+0.1
2,120,353	+				-0.3
2,120,353	+				-0.2
2,120,353	+				-0.7
2,120,354	-				-1.4
2,120,355	+				+0.8
2,120,355	+				+0.0
2,120,356	-				+0.1
2,120,356	-				+1.7
2,120,356	-				+0.1
2,120,376	+				-1.8
2,120,377	-				+1.4
2,120,377	-				-0.1
2,120,379	+				-1.0
2,120,470	+		Echvi_1804	0.14	+0.4
2,120,479	-		Echvi_1804	0.15	-2.3
2,120,482	+		Echvi_1804	0.16	-0.6
2,120,482	+		Echvi_1804	0.16	-1.1
2,120,483	-		Echvi_1804	0.16	-0.0
2,120,507	+		Echvi_1804	0.20	-1.6
2,120,549	+		Echvi_1804	0.26	-0.7
2,120,550	-		Echvi_1804	0.26	-0.3
2,120,550	-		Echvi_1804	0.26	-0.8
2,120,552	+		Echvi_1804	0.27	-1.8
2,120,650	+		Echvi_1804	0.42	+0.5
2,120,651	-		Echvi_1804	0.42	-0.3
2,120,705	-		Echvi_1804	0.50	-1.0
2,120,717	-		Echvi_1804	0.52	+0.2
2,120,736	+		Echvi_1804	0.55	+0.2
2,120,740	+		Echvi_1804	0.55	-1.8
2,120,752	+		Echvi_1804	0.57	-0.2
2,120,782	-		Echvi_1804	0.62	-1.0
2,120,845	+		Echvi_1804	0.71	-2.2
2,120,874	+		Echvi_1804	0.76	-0.7
2,120,874	+		Echvi_1804	0.76	+0.4
2,120,875	-		Echvi_1804	0.76	+0.8
2,120,877	+		Echvi_1804	0.76	-2.3
2,120,877	+		Echvi_1804	0.76	+0.4
2,120,878	-		Echvi_1804	0.76	+1.0
2,120,878	-		Echvi_1804	0.76	-2.3
2,120,900	-		Echvi_1804	0.80	-1.0
2,120,939	+		Echvi_1804	0.86	-0.5
2,120,940	-		Echvi_1804	0.86	+0.0
2,120,940	-		Echvi_1804	0.86	-1.5
2,120,987	+				+0.7
2,120,988	-				-0.9
2,120,988	-				-2.3
2,120,988	-				-0.8
2,120,989	+				+0.8
2,120,990	-				-3.0
2,121,011	+				-0.4
2,121,012	-				+0.9
2,121,012	-				-1.7
2,121,012	-				-0.5
2,121,012	-				-0.3
2,121,014	+				-0.4
2,121,014	+				-0.6
2,121,014	+				+0.1
2,121,014	+				+0.3
2,121,015	-				-0.8
2,121,031	+				-0.0
2,121,046	+				+0.0
2,121,049	+				+0.6
2,121,050	-				+2.4