Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1725

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,032,981	-				-2.0
2,033,008	+				+0.7
2,033,009	-				-0.0
2,033,126	+				+0.5
2,033,127	-				-0.7
2,033,127	-				-1.7
2,033,130	+				+0.2
2,033,131	-				+0.2
2,033,142	-				+1.0
2,033,152	+				+2.1
2,033,193	+				+0.1
2,033,193	+				+0.4
2,033,194	-				-0.3
2,033,197	+				-0.6
2,033,242	+				-0.7
2,033,243	-				+0.9
2,033,331	+				-0.2
2,033,331	+				+0.8
2,033,359	+		Echvi_1724	0.12	+1.5
2,033,420	+		Echvi_1724	0.23	-0.8
2,033,420	+		Echvi_1724	0.23	-0.6
2,033,444	-		Echvi_1724	0.28	-0.6
2,033,451	+		Echvi_1724	0.29	-0.3
2,033,483	+		Echvi_1724	0.35	+0.8
2,033,501	+		Echvi_1724	0.38	-0.5
2,033,502	-		Echvi_1724	0.39	+0.0
2,033,507	+		Echvi_1724	0.40	-0.2
2,033,507	+		Echvi_1724	0.40	-1.1
2,033,508	-		Echvi_1724	0.40	-0.2
2,033,508	-		Echvi_1724	0.40	-1.2
2,033,508	-		Echvi_1724	0.40	-0.8
2,033,508	-		Echvi_1724	0.40	-0.2
2,033,508	-		Echvi_1724	0.40	+0.5
2,033,508	-		Echvi_1724	0.40	+0.5
2,033,526	+		Echvi_1724	0.43	-0.1
2,033,526	+		Echvi_1724	0.43	-0.4
2,033,527	-		Echvi_1724	0.43	+1.0
2,033,531	+		Echvi_1724	0.44	+0.0
2,033,531	+		Echvi_1724	0.44	+0.1
2,033,532	-		Echvi_1724	0.44	+0.6
2,033,532	-		Echvi_1724	0.44	-0.8
2,033,587	+		Echvi_1724	0.55	+1.1
2,033,587	+		Echvi_1724	0.55	-0.2
2,033,588	-		Echvi_1724	0.55	-0.1
2,033,589	+		Echvi_1724	0.55	-0.4
2,033,589	+		Echvi_1724	0.55	-0.2
2,033,609	+		Echvi_1724	0.59	-0.7
2,033,621	+		Echvi_1724	0.61	-0.2
2,033,621	+		Echvi_1724	0.61	+0.3
2,033,621	+		Echvi_1724	0.61	+0.7
2,033,621	+		Echvi_1724	0.61	-0.9
2,033,639	+		Echvi_1724	0.65	+0.5
2,033,668	+		Echvi_1724	0.70	+0.6
2,033,722	-		Echvi_1724	0.80	-0.2
2,033,778	+				-1.1
2,033,778	+				+0.9
2,033,779	-				+1.4
2,033,814	+				+1.8
2,033,815	-				+1.4
2,033,815	-				-0.2
2,033,850	-				+0.6
2,033,884	+				-2.3
2,033,932	-				-0.2
2,033,952	+				+0.5
2,033,952	+				-0.6
2,033,953	-				+0.6
2,034,106	-		Echvi_1725	0.30	-0.2
2,034,123	-		Echvi_1725	0.33	-1.2
2,034,252	-		Echvi_1725	0.58	-0.2
2,034,287	+		Echvi_1725	0.65	+1.8
2,034,336	+		Echvi_1725	0.74	+0.5
2,034,336	+		Echvi_1725	0.74	+1.8
2,034,337	-		Echvi_1725	0.74	-1.3
2,034,337	-		Echvi_1725	0.74	+0.1
2,034,375	-		Echvi_1725	0.82	+0.5
2,034,394	+		Echvi_1725	0.85	-0.5
2,034,395	-		Echvi_1725	0.86	-1.0
2,034,395	-		Echvi_1725	0.86	-1.2
2,034,408	+		Echvi_1725	0.88	-0.3
2,034,408	+		Echvi_1725	0.88	-0.4
2,034,422	-				+0.2
2,034,442	+				-0.2
2,034,443	-				+0.4
2,034,474	+				-1.5
2,034,475	-				-0.9
2,034,489	-				+0.1
2,034,499	-				-0.3
2,034,555	+				-1.3
2,034,555	+				-0.4
2,034,556	-				+0.5
2,034,556	-				+0.5
2,034,559	-				+0.2
2,034,559	-				-0.2
2,034,582	+				-0.3
2,034,588	+				+0.8
2,034,599	+				+0.2
2,034,616	+				+0.1
2,034,616	+				-0.5
2,034,616	+				-0.8
2,034,625	+				-2.2
2,034,626	-				+0.4
2,034,637	-				+0.7
2,034,677	+				-0.9
2,034,678	-				+0.3
2,034,679	+				+0.3
2,034,680	-				+0.1
2,034,693	+				+0.0
2,034,693	+				-0.0
2,034,696	+				-0.4
2,034,696	+				-1.8
2,034,697	-				+2.6
2,034,697	-				+0.5
2,034,707	+				+0.4
2,034,707	+				+0.3
2,034,744	-				-0.7
2,034,796	+				-1.5
2,034,796	+				-0.7
2,034,797	-				-0.1
2,034,797	-				+1.8
2,034,797	-				-0.1
2,034,797	-				+0.7
2,034,799	+				+1.0
2,034,824	-				+0.2
2,034,824	-				+0.8
2,034,829	+				-0.9
2,034,829	+				+0.8
2,034,830	-				+1.1
2,034,846	+				+1.1
2,034,847	-				-1.1
2,034,971	+		Echvi_1726	0.20	+0.0
2,034,974	+		Echvi_1726	0.20	-0.1
2,034,975	-		Echvi_1726	0.20	+0.0
2,034,992	-		Echvi_1726	0.23	-0.9
2,034,992	-		Echvi_1726	0.23	-1.2
2,035,011	+		Echvi_1726	0.27	-0.1
2,035,067	+		Echvi_1726	0.36	-0.2
2,035,072	+		Echvi_1726	0.37	-0.1
2,035,150	-		Echvi_1726	0.51	+0.1
2,035,310	-		Echvi_1726	0.78	-0.3
2,035,334	+		Echvi_1726	0.82	-0.7
2,035,338	+		Echvi_1726	0.83	+0.1
2,035,339	-		Echvi_1726	0.83	-0.5
2,035,339	-		Echvi_1726	0.83	+0.8
2,035,407	+				-0.3
2,035,408	-				-0.1
2,035,441	+				+0.6
2,035,441	+				+0.1
2,035,441	+				+0.4
2,035,441	+				+1.4
2,035,441	+				-2.5
2,035,441	+				-0.2
2,035,441	+				-0.2
2,035,442	-				+1.5
2,035,442	-				+0.3
2,035,442	-				-0.4
2,035,442	-				-1.6
2,035,442	-				+0.2
2,035,442	-				+0.3
2,035,442	-				+0.2