Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1646

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,905,716	+		Echvi_1645	0.75	-0.6
1,905,811	-		Echvi_1645	0.78	+0.3
1,905,812	+		Echvi_1645	0.78	-0.5
1,905,813	-		Echvi_1645	0.78	-0.7
1,905,813	-		Echvi_1645	0.78	+0.2
1,905,853	-		Echvi_1645	0.79	-0.7
1,905,855	+		Echvi_1645	0.79	+0.3
1,905,856	-		Echvi_1645	0.79	-0.4
1,905,856	-		Echvi_1645	0.79	+1.0
1,905,856	-		Echvi_1645	0.79	-1.0
1,905,900	+		Echvi_1645	0.80	+0.1
1,905,901	-		Echvi_1645	0.80	+0.1
1,905,942	+		Echvi_1645	0.81	+0.8
1,905,954	-		Echvi_1645	0.82	-0.5
1,905,954	-		Echvi_1645	0.82	+0.1
1,905,994	+		Echvi_1645	0.83	-0.4
1,905,995	-		Echvi_1645	0.83	+0.5
1,906,021	+		Echvi_1645	0.83	+0.6
1,906,022	-		Echvi_1645	0.83	-0.3
1,906,100	+		Echvi_1645	0.86	+0.4
1,906,100	+		Echvi_1645	0.86	+0.4
1,906,104	+		Echvi_1645	0.86	+2.4
1,906,105	-		Echvi_1645	0.86	+0.9
1,906,105	-		Echvi_1645	0.86	-0.4
1,906,105	-		Echvi_1645	0.86	+1.1
1,906,110	+		Echvi_1645	0.86	-0.2
1,906,110	+		Echvi_1645	0.86	+0.8
1,906,111	-		Echvi_1645	0.86	-0.7
1,906,111	-		Echvi_1645	0.86	+0.3
1,906,145	+		Echvi_1645	0.87	+0.4
1,906,166	+		Echvi_1645	0.87	-0.2
1,906,167	-		Echvi_1645	0.87	+0.3
1,906,167	-		Echvi_1645	0.87	-0.1
1,906,196	+		Echvi_1645	0.88	+0.3
1,906,196	+		Echvi_1645	0.88	-0.1
1,906,196	+		Echvi_1645	0.88	+1.1
1,906,196	+		Echvi_1645	0.88	-0.1
1,906,197	-		Echvi_1645	0.88	-0.1
1,906,197	-				+1.8
1,906,197	-		Echvi_1645	0.88	-1.6
1,906,197	-		Echvi_1645	0.88	-0.2
1,906,229	+		Echvi_1645	0.89	-0.6
1,906,229	+		Echvi_1645	0.89	-0.7
1,906,277	+				-0.3
1,906,310	-				+1.4
1,906,408	+				+0.4
1,906,408	+				-0.2
1,906,409	-				+0.3
1,906,466	+				-1.2
1,906,466	+				+0.3
1,906,467	-				+0.5
1,906,467	-				-0.7
1,906,477	-				-2.2
1,906,488	-				-0.8
1,906,488	-				-0.3
1,906,606	+				-0.6
1,906,606	+				-0.4
1,906,606	+				+0.4
1,906,606	+				+0.4
1,906,606	+				-0.7
1,906,607	-				-0.2
1,906,607	-				-1.0
1,906,607	-				+1.8
1,906,607	-				-0.1
1,906,609	-				+0.1
1,906,682	-				+0.1
1,906,690	+				-0.3
1,906,691	-				+0.3
1,906,708	-				-0.2
1,906,721	+				+1.1
1,906,745	-				+0.4
1,906,745	-				-0.5
1,906,805	+		Echvi_1646	0.24	-1.7
1,906,817	+		Echvi_1646	0.27	-0.2
1,906,824	+		Echvi_1646	0.28	-0.7
1,906,832	-		Echvi_1646	0.30	-0.9
1,906,837	+		Echvi_1646	0.31	-0.4
1,906,838	-		Echvi_1646	0.32	-0.9
1,906,842	+		Echvi_1646	0.33	-0.6
1,906,843	-		Echvi_1646	0.33	-0.6
1,906,843	-		Echvi_1646	0.33	-1.2
1,906,848	-		Echvi_1646	0.34	+0.5
1,906,926	-		Echvi_1646	0.53	-0.3
1,907,102	+				+0.1
1,907,104	+				+1.8
1,907,107	+				-1.2
1,907,163	-				-0.2
1,907,163	-				-0.6
1,907,183	+				-0.2
1,907,193	+				+1.3
1,907,234	-				-0.2
1,907,255	-				-0.9
1,907,311	+				-0.4
1,907,317	+				+1.6
1,907,371	+		Echvi_1647	0.13	-1.1
1,907,371	+		Echvi_1647	0.13	+1.8
1,907,371	+		Echvi_1647	0.13	-3.4
1,907,402	+		Echvi_1647	0.16	-0.1
1,907,421	-		Echvi_1647	0.17	+0.7
1,907,422	+		Echvi_1647	0.17	+0.3
1,907,423	-		Echvi_1647	0.17	-0.1
1,907,528	+		Echvi_1647	0.24	+0.2
1,907,551	+		Echvi_1647	0.26	-0.6
1,907,552	-		Echvi_1647	0.26	+0.7
1,907,552	-		Echvi_1647	0.26	+0.3
1,907,552	-		Echvi_1647	0.26	-1.1
1,907,573	+		Echvi_1647	0.27	+0.4
1,907,573	+		Echvi_1647	0.27	-0.7
1,907,573	+		Echvi_1647	0.27	-0.8
1,907,574	-		Echvi_1647	0.27	-0.0
1,907,599	+		Echvi_1647	0.29	-1.7
1,907,600	-		Echvi_1647	0.29	+0.5
1,907,626	+		Echvi_1647	0.31	+0.4
1,907,626	+		Echvi_1647	0.31	-1.7
1,907,626	+		Echvi_1647	0.31	+1.8
1,907,626	+		Echvi_1647	0.31	+0.3
1,907,627	-		Echvi_1647	0.31	-0.3
1,907,627	-		Echvi_1647	0.31	-0.7
1,907,627	-		Echvi_1647	0.31	-0.3
1,907,627	-		Echvi_1647	0.31	+0.1
1,907,630	+		Echvi_1647	0.31	+1.8
1,907,630	+		Echvi_1647	0.31	+1.2
1,907,630	+		Echvi_1647	0.31	-0.2
1,907,630	+		Echvi_1647	0.31	+0.6
1,907,631	-		Echvi_1647	0.31	+2.0
1,907,661	+		Echvi_1647	0.33	-2.0
1,907,668	+		Echvi_1647	0.33	+1.2
1,907,669	-		Echvi_1647	0.33	+1.3
1,907,718	+		Echvi_1647	0.37	-0.8
1,907,738	+		Echvi_1647	0.38	-0.7
1,907,741	-		Echvi_1647	0.38	+0.8
1,907,741	-		Echvi_1647	0.38	-0.4
1,907,741	-		Echvi_1647	0.38	-0.0
1,907,766	+		Echvi_1647	0.40	-0.3
1,907,774	-		Echvi_1647	0.41	-0.3
1,907,779	+		Echvi_1647	0.41	-1.3
1,907,779	+		Echvi_1647	0.41	-0.6
1,907,794	+		Echvi_1647	0.42	-1.0
1,907,794	+		Echvi_1647	0.42	+0.3
1,907,794	+		Echvi_1647	0.42	-0.1
1,907,877	-		Echvi_1647	0.47	+0.6
1,907,877	-		Echvi_1647	0.47	-0.2
1,907,877	-		Echvi_1647	0.47	+1.9
1,907,879	-		Echvi_1647	0.48	+1.0
1,907,879	-		Echvi_1647	0.48	-1.9
1,907,879	-		Echvi_1647	0.48	-0.5
1,907,914	-		Echvi_1647	0.50	+0.8
1,907,914	-		Echvi_1647	0.50	-0.4
1,907,983	+		Echvi_1647	0.55	-0.6
1,908,040	+		Echvi_1647	0.58	-0.2
1,908,041	-		Echvi_1647	0.58	-0.4
1,908,041	-		Echvi_1647	0.58	+0.1
1,908,045	+		Echvi_1647	0.59	-1.4
1,908,046	-		Echvi_1647	0.59	-0.5
1,908,046	-		Echvi_1647	0.59	+1.1
1,908,054	-		Echvi_1647	0.59	-0.7
1,908,054	-		Echvi_1647	0.59	+0.0
1,908,054	-		Echvi_1647	0.59	+0.6
1,908,054	-		Echvi_1647	0.59	+0.3
1,908,054	-		Echvi_1647	0.59	-0.5
1,908,057	-		Echvi_1647	0.60	+1.6
1,908,058	+		Echvi_1647	0.60	+1.0
1,908,070	-		Echvi_1647	0.60	+0.5