Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1123

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,284,903	+		Echvi_1121	0.74	-0.3
1,284,903	+		Echvi_1121	0.74	-0.4
1,284,903	+		Echvi_1121	0.74	-0.6
1,284,905	+		Echvi_1121	0.74	+0.5
1,284,906	-		Echvi_1121	0.74	+0.6
1,284,906	-		Echvi_1121	0.74	-0.8
1,285,061	-				+1.3
1,285,061	-				-1.3
1,285,105	+				-1.9
1,285,113	-				-0.1
1,285,118	-				+0.3
1,285,120	+				-1.3
1,285,192	+				+0.2
1,285,193	-				-1.1
1,285,193	-				+0.5
1,285,193	-				-0.1
1,285,296	+				+0.2
1,285,365	+		Echvi_1122	0.16	+0.6
1,285,365	+		Echvi_1122	0.16	-0.4
1,285,365	+		Echvi_1122	0.16	+1.0
1,285,366	-		Echvi_1122	0.16	+0.1
1,285,487	+		Echvi_1122	0.35	-0.2
1,285,488	-		Echvi_1122	0.35	-0.9
1,285,509	-		Echvi_1122	0.39	+0.3
1,285,516	+		Echvi_1122	0.40	-0.7
1,285,517	-		Echvi_1122	0.40	-0.7
1,285,517	-		Echvi_1122	0.40	+0.1
1,285,517	-		Echvi_1122	0.40	+1.5
1,285,517	-		Echvi_1122	0.40	-1.9
1,285,517	-		Echvi_1122	0.40	-1.3
1,285,517	-		Echvi_1122	0.40	-0.1
1,285,517	-		Echvi_1122	0.40	-0.1
1,285,517	-		Echvi_1122	0.40	+0.3
1,285,517	-		Echvi_1122	0.40	-0.3
1,285,530	+		Echvi_1122	0.42	-0.5
1,285,559	+		Echvi_1122	0.47	-0.2
1,285,567	+		Echvi_1122	0.48	+0.6
1,285,567	+		Echvi_1122	0.48	-1.0
1,285,603	+		Echvi_1122	0.54	-1.3
1,285,603	+		Echvi_1122	0.54	-0.5
1,285,604	-		Echvi_1122	0.54	-0.9
1,285,605	+		Echvi_1122	0.54	-0.7
1,285,605	+		Echvi_1122	0.54	+0.4
1,285,681	+		Echvi_1122	0.66	-0.3
1,285,684	+		Echvi_1122	0.67	-0.4
1,285,684	+		Echvi_1122	0.67	-0.1
1,285,684	+		Echvi_1122	0.67	-0.9
1,285,685	-		Echvi_1122	0.67	-0.5
1,285,707	+		Echvi_1122	0.70	+0.1
1,285,708	-		Echvi_1122	0.70	+1.2
1,285,798	+		Echvi_1122	0.85	-0.2
1,285,798	+		Echvi_1122	0.85	-0.4
1,285,799	-		Echvi_1122	0.85	-0.5
1,285,799	-		Echvi_1122	0.85	+2.9
1,285,799	-		Echvi_1122	0.85	-0.2
1,285,806	-		Echvi_1122	0.86	-0.6
1,285,806	-		Echvi_1122	0.86	+0.2
1,285,806	-		Echvi_1122	0.86	-0.1
1,285,816	-		Echvi_1122	0.88	+1.9
1,285,848	+				+0.5
1,285,856	+				-1.0
1,285,857	-				-1.5
1,285,889	+				+1.8
1,285,890	-				+0.6
1,285,891	+				-1.6
1,285,892	-				-1.0
1,285,892	-				+0.1
1,285,922	+				+0.6
1,286,032	+		Echvi_1123	0.13	-0.2
1,286,088	-		Echvi_1123	0.19	-0.4
1,286,093	+		Echvi_1123	0.19	-0.7
1,286,094	-		Echvi_1123	0.19	-1.2
1,286,094	-		Echvi_1123	0.19	-0.2
1,286,094	-		Echvi_1123	0.19	+0.5
1,286,094	-		Echvi_1123	0.19	+0.6
1,286,370	+		Echvi_1123	0.46	+1.7
1,286,416	+		Echvi_1123	0.51	-0.7
1,286,417	-		Echvi_1123	0.51	-2.0
1,286,454	-		Echvi_1123	0.54	-0.7
1,286,477	+		Echvi_1123	0.56	-0.1
1,286,477	+		Echvi_1123	0.56	-1.9
1,286,478	-		Echvi_1123	0.57	+0.8
1,286,493	-		Echvi_1123	0.58	+2.2
1,286,502	-		Echvi_1123	0.59	-0.5
1,286,545	+		Echvi_1123	0.63	+0.5
1,286,545	+		Echvi_1123	0.63	+0.6
1,286,545	+		Echvi_1123	0.63	+0.1
1,286,545	+		Echvi_1123	0.63	-2.0
1,286,546	-		Echvi_1123	0.63	+0.2
1,286,633	-		Echvi_1123	0.72	+0.5
1,286,633	-		Echvi_1123	0.72	-0.2
1,286,633	-		Echvi_1123	0.72	-0.1
1,286,635	-		Echvi_1123	0.72	-0.2
1,286,671	-		Echvi_1123	0.75	-0.2
1,286,671	-		Echvi_1123	0.75	-0.4
1,286,726	-		Echvi_1123	0.81	+0.1
1,286,726	-		Echvi_1123	0.81	-0.5
1,286,762	-		Echvi_1123	0.84	-0.4
1,286,767	-		Echvi_1123	0.85	-0.6
1,286,772	-		Echvi_1123	0.85	-0.6
1,286,778	+		Echvi_1123	0.86	+0.2
1,286,782	+				-0.7
1,286,782	+		Echvi_1123	0.86	-0.4
1,286,783	-		Echvi_1123	0.86	+0.4
1,286,791	+		Echvi_1123	0.87	-1.5
1,286,791	+		Echvi_1123	0.87	+0.4
1,286,791	+		Echvi_1123	0.87	+1.5
1,286,792	-		Echvi_1123	0.87	+0.3
1,286,792	-		Echvi_1123	0.87	+1.4
1,286,794	+		Echvi_1123	0.87	-1.6
1,286,794	+		Echvi_1123	0.87	-0.2
1,286,802	+		Echvi_1123	0.88	-1.0
1,286,829	+				-0.6
1,286,834	+				+0.1
1,286,835	-				+0.2
1,286,840	+				+1.8
1,286,908	-				-0.1
1,286,917	+				+0.3
1,286,983	+		Echvi_1124	0.10	+0.8
1,286,984	-		Echvi_1124	0.10	-0.1
1,287,045	+		Echvi_1124	0.23	-0.4
1,287,179	-		Echvi_1124	0.52	+0.1
1,287,240	+		Echvi_1124	0.65	+0.0
1,287,241	-		Echvi_1124	0.65	-0.8
1,287,308	-		Echvi_1124	0.79	-0.1
1,287,397	-				-1.3
1,287,397	-				+0.6
1,287,411	-				-1.1
1,287,418	+				-0.1
1,287,422	-				+0.4
1,287,464	+				+0.1
1,287,535	+		Echvi_1125	0.11	-1.3
1,287,535	+		Echvi_1125	0.11	-0.4
1,287,535	+		Echvi_1125	0.11	+1.2
1,287,642	-		Echvi_1125	0.29	-0.6
1,287,642	-		Echvi_1125	0.29	-0.2
1,287,644	+		Echvi_1125	0.30	-0.5
1,287,645	-		Echvi_1125	0.30	+0.8
1,287,658	-		Echvi_1125	0.32	-0.2
1,287,658	-		Echvi_1125	0.32	+0.2
1,287,712	+		Echvi_1125	0.41	+0.3
1,287,713	-		Echvi_1125	0.41	+0.3
1,287,713	-		Echvi_1125	0.41	+0.0
1,287,734	-		Echvi_1125	0.45	-1.2
1,287,740	+		Echvi_1125	0.46	-0.2
1,287,740	+		Echvi_1125	0.46	+0.9
1,287,740	+		Echvi_1125	0.46	-0.7
1,287,740	+		Echvi_1125	0.46	+0.1
1,287,741	-		Echvi_1125	0.46	-0.8
1,287,876	+		Echvi_1125	0.69	+0.3
1,287,876	+		Echvi_1125	0.69	-2.0
1,287,876	+		Echvi_1125	0.69	+0.1
1,287,876	+		Echvi_1125	0.69	+0.3
1,287,877	-		Echvi_1125	0.69	-0.1
1,287,880	+		Echvi_1125	0.70	+0.5
1,287,892	-		Echvi_1125	0.72	+0.9
1,287,900	+		Echvi_1125	0.73	-0.5
1,287,900	+		Echvi_1125	0.73	+0.0
1,287,901	-		Echvi_1125	0.73	+0.2
1,287,901	-		Echvi_1125	0.73	-1.7
1,287,901	-		Echvi_1125	0.73	+0.1
1,287,901	-		Echvi_1125	0.73	+0.3
1,287,901	-		Echvi_1125	0.73	+0.7