Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1020

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,181,450	+		Echvi_1018	0.37	-1.6
1,181,451	-		Echvi_1018	0.37	-1.7
1,181,486	-		Echvi_1018	0.46	-0.1
1,181,486	-				+1.9
1,181,486	-		Echvi_1018	0.46	+0.3
1,181,507	-		Echvi_1018	0.51	-0.4
1,181,523	-		Echvi_1018	0.55	-1.3
1,181,523	-		Echvi_1018	0.55	-0.3
1,181,677	-				-0.7
1,181,764	+		Echvi_1019	0.24	-0.4
1,181,765	-		Echvi_1019	0.25	-1.0
1,181,809	+		Echvi_1019	0.45	-0.3
1,181,809	+		Echvi_1019	0.45	-0.6
1,181,810	-		Echvi_1019	0.45	+0.2
1,181,810	-		Echvi_1019	0.45	-0.4
1,181,810	-		Echvi_1019	0.45	-0.0
1,181,810	-		Echvi_1019	0.45	-0.6
1,181,876	-		Echvi_1019	0.75	-0.8
1,181,897	+		Echvi_1019	0.84	+0.8
1,181,897	+		Echvi_1019	0.84	-1.0
1,181,897	+		Echvi_1019	0.84	-0.1
1,181,897	+		Echvi_1019	0.84	-0.3
1,181,898	-		Echvi_1019	0.85	+2.1
1,181,898	-		Echvi_1019	0.85	+2.9
1,181,898	-		Echvi_1019	0.85	+0.5
1,181,919	+				-0.5
1,181,920	-				-0.3
1,181,923	+				+0.4
1,181,923	+				+0.3
1,181,924	-				+0.7
1,181,924	-				-0.5
1,181,924	-				+1.9
1,181,924	-				+0.1
1,181,926	+				+1.9
1,181,927	-				+0.3
1,181,966	+				+0.1
1,181,967	-				-0.5
1,181,997	-				+0.3
1,182,012	+				-1.3
1,182,012	+				+1.0
1,182,021	+				-0.4
1,182,021	+				+0.7
1,182,021	+				+0.2
1,182,038	+				-0.0
1,182,038	+				+0.9
1,182,039	-				+0.5
1,182,042	+				+0.1
1,182,062	+				+0.0
1,182,062	+				+0.2
1,182,079	+				+0.2
1,182,098	+				+0.9
1,182,098	+				+0.6
1,182,099	-				+0.1
1,182,099	-				+0.5
1,182,099	-				-0.2
1,182,099	-				-0.5
1,182,142	-				-0.1
1,182,142	-				+0.0
1,182,165	+				+0.8
1,182,166	-				+0.3
1,182,203	+				-0.3
1,182,203	+				+0.3
1,182,204	-				+0.8
1,182,204	-				-0.4
1,182,204	-				-0.8
1,182,205	+				-0.9
1,182,205	+				+0.5
1,182,205	+				-0.1
1,182,205	+				+1.0
1,182,205	+				-0.3
1,182,205	+				+1.3
1,182,205	+				-1.9
1,182,206	-				-0.4
1,182,206	-				-1.1
1,182,206	-				-1.7
1,182,206	-				-0.0
1,182,206	-				-0.3
1,182,206	-				-0.3
1,182,206	-				+0.2
1,182,206	-				+0.2
1,182,206	-				-0.6
1,182,206	-				-0.6
1,182,214	+				+1.3
1,182,214	+				-0.2
1,182,214	+				+1.3
1,182,215	-				+0.4
1,182,215	-				-1.2
1,182,253	+				-0.8
1,182,258	+				+1.6
1,182,258	+				+0.9
1,182,258	+				-0.2
1,182,258	+				+1.9
1,182,259	-				+1.9
1,182,259	-				-0.7
1,182,259	-				-0.4
1,182,259	-				-0.5
1,182,259	-				-0.5
1,182,259	-				+0.6
1,182,259	-				-0.1
1,182,271	-				-1.7
1,182,271	-				-0.9
1,182,280	-				+1.5
1,182,365	+				-1.1
1,182,365	+				+0.3
1,182,375	+				-1.1
1,182,375	+				+0.8
1,182,443	+				-1.3
1,182,444	-				-0.9
1,182,444	-				-0.1
1,182,473	-		Echvi_1020	0.15	-1.9
1,182,578	+		Echvi_1020	0.37	-1.7
1,182,637	-		Echvi_1020	0.49	-0.4
1,182,691	-		Echvi_1020	0.61	+1.9
1,182,856	+				+0.6
1,182,891	+				+0.2
1,182,891	+				+0.3
1,182,891	+				-0.5
1,182,891	+				-0.1
1,182,891	+				+0.6
1,182,892	-				-0.4
1,182,892	-				-1.4
1,182,899	+				+1.9
1,182,899	+				+2.9
1,182,899	+				+0.4
1,182,900	-				+0.2
1,182,900	-				-0.6
1,182,930	-				-0.5
1,182,936	+				-0.4
1,182,937	-				+0.3
1,182,937	-				-0.6
1,182,937	-				+0.1
1,182,937	-				+0.4
1,182,937	-				-0.5
1,182,961	+				-0.5
1,182,962	-				-0.3
1,182,963	+				-0.5
1,183,021	-				-0.8
1,183,035	+				+0.3
1,183,053	+				-0.0
1,183,053	+				-1.0
1,183,053	+				+0.7
1,183,054	-				-0.1
1,183,128	-				-0.3
1,183,132	+				-0.1
1,183,132	+				-0.1
1,183,133	-				+0.9
1,183,154	-		Echvi_1021	0.10	-1.5
1,183,162	+		Echvi_1021	0.11	+0.2
1,183,168	+		Echvi_1021	0.11	-0.3
1,183,169	-		Echvi_1021	0.11	+0.2
1,183,169	-		Echvi_1021	0.11	-0.4
1,183,196	-		Echvi_1021	0.13	-0.2
1,183,196	-		Echvi_1021	0.13	-1.0
1,183,236	+		Echvi_1021	0.16	-0.9
1,183,237	-		Echvi_1021	0.17	+0.1
1,183,237	-		Echvi_1021	0.17	+0.2
1,183,363	+		Echvi_1021	0.26	-0.3
1,183,412	-		Echvi_1021	0.30	-0.3
1,183,565	+		Echvi_1021	0.41	+0.7
1,183,566	-		Echvi_1021	0.41	+0.1
1,183,566	-		Echvi_1021	0.41	-1.1
1,183,566	-		Echvi_1021	0.41	-0.9
1,183,607	+		Echvi_1021	0.45	+0.8
1,183,607	+		Echvi_1021	0.45	-0.7
1,183,607	+		Echvi_1021	0.45	+0.1
1,183,608	-		Echvi_1021	0.45	-1.9
1,183,618	+		Echvi_1021	0.45	-0.7
1,183,620	+		Echvi_1021	0.46	-0.3
1,183,620	+		Echvi_1021	0.46	-0.4
1,183,620	+		Echvi_1021	0.46	-0.2
1,183,621	-		Echvi_1021	0.46	-0.7
1,183,711	+		Echvi_1021	0.52	+0.1
1,183,711	+		Echvi_1021	0.52	-0.9
1,183,711	+		Echvi_1021	0.52	+0.3
1,183,712	-		Echvi_1021	0.53	-0.3
1,183,712	-		Echvi_1021	0.53	+0.9
1,183,718	-		Echvi_1021	0.53	-1.3
1,183,742	+		Echvi_1021	0.55	-0.4
1,183,742	+		Echvi_1021	0.55	-0.3
1,183,743	-		Echvi_1021	0.55	+0.1
1,183,743	-		Echvi_1021	0.55	-0.1
1,183,743	-		Echvi_1021	0.55	-1.5
1,183,792	+		Echvi_1021	0.59	+0.8
1,183,834	+		Echvi_1021	0.62	+0.1
1,183,835	-		Echvi_1021	0.62	-0.8
1,183,835	-		Echvi_1021	0.62	-0.1
1,183,835	-		Echvi_1021	0.62	+0.9