Experiment: m.b. Spectinomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0848 and Echvi_0849 are separated by 3 nucleotides Echvi_0849 and Echvi_0850 overlap by 1 nucleotides Echvi_0850 and Echvi_0851 are separated by 12 nucleotides Echvi_0851 and Echvi_0852 are separated by 107 nucleotides
Echvi_0848: Echvi_0848 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 971,162 to 971,950
_0848
Echvi_0849: Echvi_0849 - probable S-adenosylmethionine-dependent methyltransferase, YraL family, at 971,954 to 972,640
_0849
Echvi_0850: Echvi_0850 - Pterin-4a-carbinolamine dehydratase, at 972,640 to 972,870
_0850
Echvi_0851: Echvi_0851 - Uncharacterized conserved protein, at 972,883 to 973,152
_0851
Echvi_0852: Echvi_0852 - Parvulin-like peptidyl-prolyl isomerase, at 973,260 to 975,368
_0852
Position (kb) 972
973 Strain fitness (log2 ratio) -2
-1
0
1
2 at 971.699 kb on + strand, within Echvi_0848 at 971.700 kb on - strand, within Echvi_0848 at 971.700 kb on - strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.710 kb on + strand, within Echvi_0848 at 971.712 kb on + strand, within Echvi_0848 at 971.712 kb on + strand, within Echvi_0848 at 971.752 kb on + strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.821 kb on - strand, within Echvi_0848 at 971.852 kb on + strand, within Echvi_0848 at 971.857 kb on + strand, within Echvi_0848 at 971.931 kb on - strand at 971.956 kb on - strand at 971.975 kb on - strand at 971.979 kb on - strand at 971.998 kb on + strand at 971.999 kb on - strand at 971.999 kb on - strand at 972.007 kb on + strand at 972.008 kb on - strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.009 kb on + strand at 972.012 kb on + strand at 972.012 kb on + strand at 972.054 kb on + strand, within Echvi_0849 at 972.338 kb on + strand, within Echvi_0849 at 972.344 kb on + strand, within Echvi_0849 at 972.434 kb on + strand, within Echvi_0849 at 972.457 kb on + strand, within Echvi_0849 at 972.457 kb on + strand, within Echvi_0849 at 972.462 kb on + strand, within Echvi_0849 at 972.463 kb on - strand, within Echvi_0849 at 972.560 kb on + strand, within Echvi_0849 at 972.560 kb on + strand, within Echvi_0849 at 972.574 kb on + strand at 972.577 kb on + strand at 972.641 kb on + strand at 972.641 kb on + strand at 972.642 kb on - strand at 972.642 kb on - strand at 972.693 kb on + strand, within Echvi_0850 at 972.835 kb on + strand, within Echvi_0850 at 972.843 kb on + strand, within Echvi_0850 at 972.844 kb on - strand, within Echvi_0850 at 972.844 kb on - strand, within Echvi_0850 at 972.923 kb on + strand, within Echvi_0851 at 972.924 kb on - strand, within Echvi_0851 at 972.925 kb on + strand, within Echvi_0851 at 972.925 kb on + strand, within Echvi_0851 at 972.926 kb on - strand, within Echvi_0851 at 972.926 kb on - strand, within Echvi_0851 at 972.980 kb on + strand, within Echvi_0851 at 972.980 kb on + strand, within Echvi_0851 at 973.079 kb on + strand, within Echvi_0851 at 973.079 kb on + strand, within Echvi_0851 at 973.080 kb on - strand, within Echvi_0851 at 973.131 kb on + strand at 973.134 kb on + strand at 973.156 kb on - strand at 973.156 kb on - strand at 973.156 kb on - strand at 973.166 kb on - strand at 973.202 kb on - strand at 973.258 kb on + strand at 973.258 kb on + strand at 973.258 kb on + strand at 973.259 kb on - strand at 973.259 kb on - strand at 973.261 kb on + strand at 973.272 kb on - strand at 973.272 kb on - strand at 973.273 kb on + strand at 973.279 kb on + strand at 973.279 kb on + strand at 973.279 kb on + strand at 973.279 kb on + strand at 973.287 kb on - strand at 973.322 kb on + strand at 973.322 kb on + strand at 973.322 kb on + strand at 973.322 kb on + strand at 973.322 kb on + strand at 973.323 kb on - strand at 973.323 kb on - strand at 973.324 kb on + strand at 973.324 kb on + strand at 973.324 kb on + strand at 973.324 kb on + strand at 973.325 kb on - strand at 973.325 kb on - strand at 973.325 kb on - strand at 973.331 kb on + strand at 973.331 kb on + strand at 973.332 kb on - strand at 973.353 kb on - strand at 973.383 kb on + strand at 973.434 kb on - strand at 973.446 kb on - strand at 973.677 kb on + strand, within Echvi_0852 at 973.677 kb on + strand, within Echvi_0852 at 973.713 kb on - strand, within Echvi_0852 at 973.719 kb on + strand, within Echvi_0852 at 973.719 kb on + strand, within Echvi_0852 at 973.719 kb on + strand, within Echvi_0852 at 973.720 kb on - strand, within Echvi_0852 at 973.728 kb on + strand, within Echvi_0852 at 973.735 kb on + strand, within Echvi_0852 at 973.735 kb on + strand, within Echvi_0852 at 973.736 kb on - strand, within Echvi_0852 at 973.765 kb on - strand, within Echvi_0852 at 973.800 kb on + strand, within Echvi_0852 at 973.820 kb on + strand, within Echvi_0852 at 973.820 kb on + strand, within Echvi_0852 at 973.821 kb on - strand, within Echvi_0852 at 973.821 kb on - strand, within Echvi_0852 at 973.827 kb on - strand, within Echvi_0852 at 973.829 kb on + strand, within Echvi_0852 at 973.829 kb on + strand, within Echvi_0852 at 973.830 kb on - strand, within Echvi_0852
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.12 mg/ml remove 971,699 + Echvi_0848 0.68 +0.2 971,700 - Echvi_0848 0.68 -0.8 971,700 - Echvi_0848 0.68 -0.5 971,710 + Echvi_0848 0.69 -0.0 971,710 + Echvi_0848 0.69 +0.5 971,710 + Echvi_0848 0.69 -0.1 971,712 + Echvi_0848 0.70 +0.5 971,712 + Echvi_0848 0.70 +0.5 971,752 + Echvi_0848 0.75 -0.5 971,821 - Echvi_0848 0.84 -0.6 971,821 - Echvi_0848 0.84 -1.7 971,821 - Echvi_0848 0.84 -2.5 971,821 - Echvi_0848 0.84 -0.3 971,852 + Echvi_0848 0.87 -0.4 971,857 + Echvi_0848 0.88 -0.5 971,931 - +0.2 971,956 - -0.4 971,975 - -1.0 971,979 - -1.0 971,998 + -0.9 971,999 - -0.1 971,999 - -0.8 972,007 + +0.9 972,008 - -1.4 972,009 + -0.6 972,009 + -0.5 972,009 + -0.9 972,009 + -1.9 972,012 + -1.4 972,012 + +1.7 972,054 + Echvi_0849 0.15 +0.1 972,338 + Echvi_0849 0.56 -0.4 972,344 + Echvi_0849 0.57 +0.4 972,434 + Echvi_0849 0.70 -1.1 972,457 + Echvi_0849 0.73 +1.9 972,457 + Echvi_0849 0.73 +1.6 972,462 + Echvi_0849 0.74 -0.3 972,463 - Echvi_0849 0.74 -0.6 972,560 + Echvi_0849 0.88 -1.4 972,560 + Echvi_0849 0.88 +0.7 972,574 + -0.1 972,577 + +0.5 972,641 + +0.2 972,641 + +0.5 972,642 - +0.6 972,642 - -0.5 972,693 + Echvi_0850 0.23 -0.8 972,835 + Echvi_0850 0.84 -1.3 972,843 + Echvi_0850 0.88 -0.4 972,844 - Echvi_0850 0.88 -1.8 972,844 - Echvi_0850 0.88 +1.9 972,923 + Echvi_0851 0.15 -0.8 972,924 - Echvi_0851 0.15 -1.5 972,925 + Echvi_0851 0.16 +0.3 972,925 + Echvi_0851 0.16 -0.5 972,926 - Echvi_0851 0.16 -1.8 972,926 - Echvi_0851 0.16 -0.7 972,980 + Echvi_0851 0.36 -2.1 972,980 + Echvi_0851 0.36 +0.4 973,079 + Echvi_0851 0.73 -0.7 973,079 + Echvi_0851 0.73 -0.7 973,080 - Echvi_0851 0.73 +0.1 973,131 + +0.7 973,134 + -0.3 973,156 - -1.0 973,156 - -1.4 973,156 - -1.9 973,166 - -0.7 973,202 - -1.4 973,258 + +0.1 973,258 + -1.1 973,258 + +1.1 973,259 - +0.6 973,259 - -0.3 973,261 + +0.2 973,272 - -1.3 973,272 - +1.1 973,273 + -1.5 973,279 + +0.3 973,279 + +2.2 973,279 + +1.3 973,279 + +0.6 973,287 - +0.5 973,322 + -0.4 973,322 + +0.0 973,322 + -0.6 973,322 + -0.1 973,322 + +0.3 973,323 - +1.1 973,323 - -0.1 973,324 + +0.4 973,324 + +0.3 973,324 + +0.0 973,324 + -0.1 973,325 - +0.1 973,325 - +0.9 973,325 - +0.1 973,331 + -0.1 973,331 + -1.8 973,332 - -0.8 973,353 - -0.6 973,383 + -1.1 973,434 - +0.0 973,446 - -0.7 973,677 + Echvi_0852 0.20 -0.2 973,677 + Echvi_0852 0.20 -0.7 973,713 - Echvi_0852 0.21 +0.6 973,719 + Echvi_0852 0.22 -0.1 973,719 + Echvi_0852 0.22 -0.7 973,719 + Echvi_0852 0.22 -0.2 973,720 - Echvi_0852 0.22 +1.3 973,728 + Echvi_0852 0.22 -1.3 973,735 + Echvi_0852 0.23 -1.9 973,735 + Echvi_0852 0.23 -1.5 973,736 - Echvi_0852 0.23 +0.1 973,765 - Echvi_0852 0.24 -0.7 973,800 + Echvi_0852 0.26 -0.3 973,820 + Echvi_0852 0.27 +0.2 973,820 + Echvi_0852 0.27 -0.4 973,821 - Echvi_0852 0.27 -1.7 973,821 - Echvi_0852 0.27 +0.9 973,827 - Echvi_0852 0.27 -0.1 973,829 + Echvi_0852 0.27 +0.1 973,829 + Echvi_0852 0.27 -0.1 973,830 - Echvi_0852 0.27 +0.4
Or see this region's nucleotide sequence