Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0824

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
940,971	+		Echvi_0823	0.43	-0.1
940,971	+		Echvi_0823	0.43	+0.5
940,971	+		Echvi_0823	0.43	+1.6
940,984	-		Echvi_0823	0.44	-0.7
941,044	+		Echvi_0823	0.47	+0.9
941,045	-		Echvi_0823	0.47	-0.5
941,045	-		Echvi_0823	0.47	-1.5
941,045	-		Echvi_0823	0.47	+0.0
941,045	-		Echvi_0823	0.47	+0.0
941,045	-		Echvi_0823	0.47	-0.1
941,045	-		Echvi_0823	0.47	+0.9
941,045	-		Echvi_0823	0.47	-0.9
941,045	-		Echvi_0823	0.47	+1.0
941,054	+		Echvi_0823	0.48	-0.3
941,204	+		Echvi_0823	0.56	-0.8
941,205	-		Echvi_0823	0.56	+1.2
941,212	+		Echvi_0823	0.57	-0.1
941,212	+		Echvi_0823	0.57	+2.5
941,213	-		Echvi_0823	0.57	-0.6
941,217	+		Echvi_0823	0.57	-1.3
941,218	-		Echvi_0823	0.57	-0.6
941,314	+		Echvi_0823	0.63	-0.3
941,317	+		Echvi_0823	0.63	+0.5
941,346	+		Echvi_0823	0.65	-1.4
941,347	-		Echvi_0823	0.65	-0.4
941,347	-		Echvi_0823	0.65	+2.0
941,433	-		Echvi_0823	0.70	+0.7
941,538	+		Echvi_0823	0.76	-0.4
941,597	+		Echvi_0823	0.79	-0.8
941,624	+		Echvi_0823	0.81	-0.7
941,624	+		Echvi_0823	0.81	-0.0
941,625	-		Echvi_0823	0.81	+0.5
941,625	-		Echvi_0823	0.81	-0.6
941,625	-		Echvi_0823	0.81	-0.6
941,625	-		Echvi_0823	0.81	+0.5
941,625	-		Echvi_0823	0.81	+0.9
941,655	+		Echvi_0823	0.83	+0.5
941,657	+		Echvi_0823	0.83	-0.1
941,657	+				+2.9
941,657	+		Echvi_0823	0.83	-0.8
941,657	+		Echvi_0823	0.83	-0.6
941,658	-		Echvi_0823	0.83	+0.1
941,658	-		Echvi_0823	0.83	-0.4
941,658	-		Echvi_0823	0.83	+0.6
941,658	-		Echvi_0823	0.83	-0.6
941,658	-		Echvi_0823	0.83	+0.0
941,670	+		Echvi_0823	0.83	-0.0
941,723	+		Echvi_0823	0.86	-0.4
941,724	-		Echvi_0823	0.87	+1.0
941,724	-		Echvi_0823	0.87	+1.1
941,724	-		Echvi_0823	0.87	-0.2
941,724	-		Echvi_0823	0.87	-2.6
941,726	-		Echvi_0823	0.87	+0.1
941,726	-		Echvi_0823	0.87	-1.2
941,828	+				-0.4
941,829	-				-0.1
941,912	-				-0.1
941,955	-				+0.1
941,955	-				-0.3
941,960	+				+0.6
941,961	-				+0.3
941,961	-				+0.5
941,974	-				-0.4
942,064	-		Echvi_0824	0.10	-0.8
942,256	+		Echvi_0824	0.30	-0.3
942,256	+		Echvi_0824	0.30	+1.9
942,262	-		Echvi_0824	0.31	+1.3
942,267	-		Echvi_0824	0.31	-0.3
942,267	-		Echvi_0824	0.31	+1.9
942,273	+		Echvi_0824	0.32	-1.0
942,356	+		Echvi_0824	0.41	-0.3
942,357	-		Echvi_0824	0.41	-0.2
942,453	+		Echvi_0824	0.51	+0.0
942,453	+		Echvi_0824	0.51	-0.3
942,453	+		Echvi_0824	0.51	-0.2
942,566	+		Echvi_0824	0.63	-0.3
942,581	-		Echvi_0824	0.64	-0.5
942,623	+		Echvi_0824	0.69	-0.5
942,624	-		Echvi_0824	0.69	-1.2
942,624	-		Echvi_0824	0.69	+0.7
942,624	-		Echvi_0824	0.69	-0.0
942,624	-		Echvi_0824	0.69	-0.1
942,677	+		Echvi_0824	0.74	-0.4
942,678	-		Echvi_0824	0.74	+0.1
942,678	-		Echvi_0824	0.74	+1.1
942,683	+		Echvi_0824	0.75	-1.5
942,779	+		Echvi_0824	0.85	-0.1
942,780	-		Echvi_0824	0.85	-0.1
942,780	-		Echvi_0824	0.85	-0.7
942,780	-		Echvi_0824	0.85	-0.1
942,783	+		Echvi_0824	0.85	-1.0
942,784	-		Echvi_0824	0.85	-1.4
942,784	-		Echvi_0824	0.85	-0.2
942,852	-				+0.7
942,963	+				-1.0
942,963	+				-0.2
942,963	+				+0.0
942,963	+				-0.2
942,963	+				+0.1
942,963	+				-0.2
942,963	+				-0.3
942,963	+				+0.0
942,964	-				-1.0
942,964	-				-0.7
942,964	-				-0.6
942,964	-				+0.5
942,964	-				+0.4
942,964	-				-1.7
942,965	+				+0.6
942,972	-				-0.6
942,972	-				-1.2
942,972	-				+0.0
943,029	+				+2.1
943,030	-				-1.0
943,030	-				+0.8
943,030	-				-0.4
943,030	-				-0.2
943,030	-				+0.5
943,030	-				-0.3
943,278	+		Echvi_0825	0.30	+0.9
943,531	+		Echvi_0825	0.54	-0.9
943,632	-		Echvi_0825	0.64	+0.1
943,749	+		Echvi_0825	0.75	-0.7