Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0346

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
367,676	-		Echvi_0344	0.87	-0.9
367,683	+		Echvi_0344	0.88	+0.5
367,746	+				+0.1
367,839	+				-0.8
367,856	+				-0.2
367,856	+				+0.5
367,856	+				+1.8
367,856	+				+0.2
367,856	+				+0.2
367,856	+				+2.8
367,857	-				-1.1
367,857	-				-0.5
367,857	-				-0.4
367,857	-				-0.4
367,889	+				+0.4
367,889	+				-0.8
367,890	-				-1.2
367,890	-				-1.4
367,944	-				-0.3
367,944	-				-0.5
367,944	-				-0.6
367,954	-				-1.1
368,029	+				-1.8
368,044	+				+0.5
368,077	-				+1.1
368,133	+		Echvi_0345	0.17	+0.2
368,133	+		Echvi_0345	0.17	+0.1
368,134	-		Echvi_0345	0.17	+0.6
368,177	-		Echvi_0345	0.25	-0.5
368,270	+		Echvi_0345	0.42	+1.4
368,270	+		Echvi_0345	0.42	+1.2
368,271	-		Echvi_0345	0.42	-0.9
368,271	-		Echvi_0345	0.42	+0.6
368,287	+		Echvi_0345	0.45	+1.1
368,287	+		Echvi_0345	0.45	+1.3
368,287	+		Echvi_0345	0.45	+0.7
368,287	+		Echvi_0345	0.45	+0.1
368,288	-		Echvi_0345	0.45	-0.4
368,288	-		Echvi_0345	0.45	-2.1
368,288	-		Echvi_0345	0.45	-0.2
368,288	-		Echvi_0345	0.45	-0.5
368,291	+		Echvi_0345	0.46	+0.1
368,291	+		Echvi_0345	0.46	+0.4
368,291	+		Echvi_0345	0.46	-1.1
368,291	+		Echvi_0345	0.46	-0.1
368,291	+		Echvi_0345	0.46	+0.8
368,292	-		Echvi_0345	0.46	+1.1
368,384	+		Echvi_0345	0.63	-0.2
368,483	+		Echvi_0345	0.81	+0.4
368,484	-		Echvi_0345	0.81	-1.4
368,484	-		Echvi_0345	0.81	-0.8
368,533	+				+0.1
368,534	-				-1.0
368,567	+				-0.3
368,568	-				+1.2
368,568	-				-0.1
368,568	-				+0.1
368,571	+				+1.1
368,571	+				-0.5
368,572	-				-0.0
368,572	-				-1.7
368,575	-				+0.2
368,590	+				+0.1
368,594	+				-0.2
368,594	+				-0.0
368,653	+				+0.7
368,674	+				+0.8
368,749	+		Echvi_0346	0.19	+1.9
368,750	-		Echvi_0346	0.19	-0.3
368,782	+		Echvi_0346	0.26	+2.8
368,782	+		Echvi_0346	0.26	+0.4
368,782	+		Echvi_0346	0.26	+1.8
368,782	+		Echvi_0346	0.26	+0.0
368,782	+		Echvi_0346	0.26	-0.2
368,831	+		Echvi_0346	0.37	+0.9
368,995	+		Echvi_0346	0.74	+1.1
368,996	-		Echvi_0346	0.75	+0.4
369,074	+				+0.4
369,123	+				-1.0
369,124	-				+0.9
369,143	+				-0.5
369,144	-				-0.9
369,144	-				-2.1
369,144	-				+0.8
369,144	-				-0.7
369,220	+		Echvi_0347	0.15	+0.1
369,221	-		Echvi_0347	0.15	-0.0
369,419	+		Echvi_0347	0.35	+1.1
369,420	-		Echvi_0347	0.35	+1.5
369,486	+		Echvi_0347	0.42	-0.2
369,486	+		Echvi_0347	0.42	+1.0
369,653	+		Echvi_0347	0.58	-1.0
369,653	+		Echvi_0347	0.58	-0.0
369,654	-		Echvi_0347	0.59	+0.2
369,702	+		Echvi_0347	0.63	-0.2
369,733	-		Echvi_0347	0.66	+1.1
369,827	+		Echvi_0347	0.76	-0.5
369,827	+		Echvi_0347	0.76	+0.4
369,828	-		Echvi_0347	0.76	-0.3
370,048	-				-2.5
370,048	-				+0.1
370,051	+				+0.1
370,079	-				+1.8
370,079	-				+0.4
370,079	-				-1.0
370,083	-				+0.2