Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0288

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
297,457	-		Echvi_0286	0.53	-0.7
297,635	-				-1.4
297,775	-		Echvi_0287	0.27	+1.3
297,775	-		Echvi_0287	0.27	+0.8
297,823	-		Echvi_0287	0.35	+0.8
297,835	-		Echvi_0287	0.37	-1.3
297,873	-		Echvi_0287	0.44	+0.5
297,876	-		Echvi_0287	0.44	-0.5
297,876	-		Echvi_0287	0.44	+0.4
298,055	-		Echvi_0287	0.74	+0.6
298,055	-		Echvi_0287	0.74	-2.2
298,140	-		Echvi_0287	0.89	-0.5
298,236	-				+1.1
298,321	-				-1.0
298,321	-				-0.8
298,385	+				-0.9
298,386	-				-1.2
298,387	+				-0.6
298,387	+				-1.0
298,387	+				-0.1
298,555	+		Echvi_0288	0.26	-0.6
298,617	+		Echvi_0288	0.33	-0.7
298,660	+		Echvi_0288	0.38	-0.5
298,660	+		Echvi_0288	0.38	-0.4
298,660	+		Echvi_0288	0.38	-1.0
298,736	+		Echvi_0288	0.47	-1.1
298,737	-		Echvi_0288	0.47	-0.2
298,867	-		Echvi_0288	0.63	-3.3
298,990	+		Echvi_0288	0.78	-0.4
299,028	-		Echvi_0288	0.82	-1.4
299,028	-		Echvi_0288	0.82	-1.1
299,029	+		Echvi_0288	0.82	-0.7
299,081	-		Echvi_0288	0.89	-0.5
299,087	-		Echvi_0288	0.89	-0.1
299,087	-		Echvi_0288	0.89	-1.1
299,110	-				-0.9
299,141	+				+0.4
299,141	+				+1.5
299,177	+				-0.0
299,368	+				+0.2
299,369	-				-0.8
299,468	+				+0.1
299,469	-				-0.0
299,469	-				+0.6
299,469	-				+0.8
299,471	+				-0.4
299,472	-				+0.9
299,472	-				-0.1
299,476	+				+0.6
299,524	+				-0.3
299,525	-				+0.2
299,525	-				-0.3
299,525	-				+0.3
299,525	-				+0.2
299,528	+				+0.5
299,528	+				+0.6
299,529	-				+0.3
299,529	-				+1.6
299,550	-				+0.9
299,550	-				-0.1
299,600	+				-0.3
299,601	-				-0.5
299,601	-				-1.0
299,601	-				+1.5
299,602	+				-0.0
299,603	-				+1.8
299,610	-				+1.0
299,617	+				+0.7
299,618	-				+0.0
299,618	-				-0.6
299,621	-				-0.2
299,633	+				-0.1
299,634	-				+1.3
299,634	-				+0.9
299,634	-				-1.3
299,634	-				-0.1
299,640	+				-0.1
299,643	-				+0.6
299,654	-				+0.8
299,667	-				+0.4
299,770	+				+0.0
299,770	+				+0.0
299,770	+				+0.6
299,772	+				+0.7
299,773	-				+2.2
299,821	-				+0.6
299,848	-				+1.8
299,884	-				-0.3
299,892	+				-0.6
299,892	+				+0.7
299,892	+				-0.3
299,892	+				+0.9
299,892	+				-1.3
299,893	-				-0.6
299,893	-				-0.2
299,893	-				-0.1
299,895	+				+0.1
299,895	+				+0.2
299,895	+				-0.0
299,896	-				-0.4
299,896	-				+0.3
299,896	-				+0.6
299,901	-				+2.2
299,914	+				+0.3
299,914	+				-1.3
299,914	+				-0.5
299,925	+				+0.4
299,926	-				-0.5
299,926	-				+1.2
299,930	-				-0.9
299,930	-				+0.1
299,947	+				-0.5
299,981	+				-2.6
299,989	+				-0.8
299,990	-				-0.0
299,993	+				+2.3
299,993	+				-0.7
299,994	-				+0.6
300,006	+		Echvi_0289	0.12	+0.7
300,011	-		Echvi_0289	0.17	-1.0
300,011	-		Echvi_0289	0.17	+0.2
300,011	-		Echvi_0289	0.17	+0.9
300,024	+		Echvi_0289	0.28	-0.2
300,037	+		Echvi_0289	0.39	-0.2
300,037	+		Echvi_0289	0.39	+1.4
300,038	-		Echvi_0289	0.40	-0.3
300,038	-		Echvi_0289	0.40	+0.1
300,038	-		Echvi_0289	0.40	-0.3
300,042	-		Echvi_0289	0.44	+0.5
300,042	-		Echvi_0289	0.44	+0.8
300,042	-		Echvi_0289	0.44	+0.8
300,050	-		Echvi_0289	0.51	-0.0
300,050	-		Echvi_0289	0.51	+0.5
300,050	-		Echvi_0289	0.51	+1.2
300,086	-		Echvi_0289	0.82	+0.3
300,118	+				+0.2
300,119	-				+0.0
300,119	-				-0.7
300,127	+				+0.0
300,128	-				+0.3
300,133	+				+0.1
300,145	-				-0.4
300,169	+		Echvi_0290	0.12	+0.0
300,169	+		Echvi_0290	0.12	-0.3