Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4161

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,977,580	-		Echvi_4159	0.82	-0.8
4,977,588	+		Echvi_4159	0.83	-0.1
4,977,611	+		Echvi_4159	0.86	-1.5
4,977,611	+		Echvi_4159	0.86	-0.4
4,977,653	+		Echvi_4159	0.90	-0.7
4,977,653	+		Echvi_4159	0.90	+0.4
4,977,675	+				+0.8
4,977,720	+				-0.4
4,977,721	-				+0.1
4,977,773	+				+1.6
4,977,774	-				-0.5
4,977,778	-				-1.6
4,977,778	-				-2.7
4,977,778	-				-0.5
4,977,786	-				-0.2
4,977,956	+				+0.4
4,977,957	-				+0.6
4,977,964	+				-0.4
4,977,998	-				+0.7
4,978,017	-				-0.2
4,978,043	+				-1.2
4,978,049	-				+0.7
4,978,080	-				-0.3
4,978,127	+				-0.2
4,978,127	+				-0.2
4,978,143	-				+0.8
4,978,155	-		Echvi_4160	0.12	-0.2
4,978,340	+		Echvi_4160	0.52	-0.3
4,978,340	+		Echvi_4160	0.52	+0.3
4,978,340	+		Echvi_4160	0.52	+2.6
4,978,340	+		Echvi_4160	0.52	+0.2
4,978,340	+		Echvi_4160	0.52	+0.6
4,978,340	+		Echvi_4160	0.52	-0.4
4,978,340	+		Echvi_4160	0.52	+0.2
4,978,340	+		Echvi_4160	0.52	+0.2
4,978,341	-		Echvi_4160	0.52	+0.2
4,978,341	-		Echvi_4160	0.52	+0.2
4,978,341	-		Echvi_4160	0.52	-0.2
4,978,342	+		Echvi_4160	0.53	-0.5
4,978,342	+		Echvi_4160	0.53	-0.3
4,978,342	+		Echvi_4160	0.53	+0.0
4,978,342	+		Echvi_4160	0.53	-0.2
4,978,342	+		Echvi_4160	0.53	+1.0
4,978,343	-		Echvi_4160	0.53	-0.6
4,978,343	-		Echvi_4160	0.53	-1.0
4,978,343	-		Echvi_4160	0.53	-0.1
4,978,343	-		Echvi_4160	0.53	+0.5
4,978,343	-		Echvi_4160	0.53	+0.8
4,978,343	-		Echvi_4160	0.53	-1.0
4,978,343	-		Echvi_4160	0.53	+1.1
4,978,347	+		Echvi_4160	0.54	-0.7
4,978,350	-		Echvi_4160	0.54	-0.2
4,978,394	+		Echvi_4160	0.64	-1.0
4,978,450	+		Echvi_4160	0.76	-0.4
4,978,451	-		Echvi_4160	0.76	-0.8
4,978,567	-				-0.1
4,978,567	-				-0.1
4,978,571	+				-0.1
4,978,572	-				-0.5
4,978,584	-				+0.3
4,978,593	+				-1.0
4,978,594	-				-0.4
4,978,594	-				-0.9
4,978,594	-				-1.0
4,978,629	+		Echvi_4161	0.11	-1.4
4,978,633	+		Echvi_4161	0.12	-0.4
4,978,716	+		Echvi_4161	0.31	-1.2
4,979,024	-				-1.6
4,979,037	+				+0.2
4,979,309	+		Echvi_4162	0.44	+0.2
4,979,310	-		Echvi_4162	0.45	-1.0
4,979,319	-		Echvi_4162	0.46	-0.9
4,979,454	+		Echvi_4162	0.68	-0.5
4,979,454	+		Echvi_4162	0.68	+0.3
4,979,455	-		Echvi_4162	0.68	+2.0
4,979,455	-		Echvi_4162	0.68	-0.5
4,979,538	+		Echvi_4162	0.82	-2.5
4,979,539	-				+0.0
4,979,539	-		Echvi_4162	0.82	-0.0
4,979,539	-		Echvi_4162	0.82	+0.8
4,979,570	+		Echvi_4162	0.87	+1.6
4,979,570	+		Echvi_4162	0.87	+2.0
4,979,570	+		Echvi_4162	0.87	+1.6
4,979,571	-		Echvi_4162	0.88	-0.8
4,979,571	-		Echvi_4162	0.88	+0.0
4,979,571	-		Echvi_4162	0.88	+0.0
4,979,637	-				-0.6
4,979,657	+				-0.2
4,979,657	+				+0.9
4,979,658	-				-0.3
4,979,678	-				+0.5
4,979,750	-				-0.7
4,979,775	+				-0.7
4,979,775	+				+0.3
4,979,780	+				-1.0
4,979,830	-				+0.9
4,979,944	-				-1.0
4,980,009	-				+0.4